RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 MAGEB2O15479 319 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 STBD1O95210 358 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 C6orf222P0C671 652 aaPredicted RBP10.52□□□□□ -0.73
YBX3-215ENST00000544504 CST5P28325 142 aaPredicted RBP10.52□□□□□ -0.73
YBX3-215ENST00000544504 DNM2P50570 870 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 POLGP54098 1239 aaPredicted RBP10.52□□□□□ -0.73
YBX3-215ENST00000544504 TBC1D8BQ0IIM8 1120 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 ALCAMQ13740 583 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 GIT2Q14161 759 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 PLCB4Q15147 1175 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 PPP2R5AQ15172 486 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 SKIV2LQ15477 1246 aaKnown RBP10.52□□□□□ -0.73
YBX3-215ENST00000544504 KMT5BQ4FZB7 885 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 COBLL1Q53SF7 1204 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 ARSHQ5FYA8 562 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 HERC4Q5GLZ8 1057 aaPredicted RBP10.52□□□□□ -0.73
YBX3-215ENST00000544504 PCSK9Q8NBP7 692 aaKnown RBP10.52□□□□□ -0.73
YBX3-215ENST00000544504 RETREG2Q8NC44 543 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 TCP11Q8WWU5 503 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 BPIFA3Q9BQP9 254 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 FUCA2Q9BTY2 467 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 RUSC1Q9BVN2 902 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 ATP6V0A4Q9HBG4 840 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 PARVGQ9HBI0 331 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 OLFML3Q9NRN5 406 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 COG5Q9UP83 839 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 WDR81Q562E7 1941 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 BIN1O00499 593 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 PSMA7O14818 248 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 ADCY6O43306 1168 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 KLRC4O43908 158 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 USO1O60763 962 aaKnown RBP10.51□□□□□ -0.73
YBX3-215ENST00000544504 CABYRO75952 493 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 F2P00734 622 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 ACRP10323 421 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 MAPTP10636 758 aaKnown RBP10.51□□□□□ -0.73
YBX3-215ENST00000544504 GNAT1P11488 350 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 ATP4AP20648 1035 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 ZNF131P52739 623 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 SMTNP53814 917 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 COASYQ13057 564 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 TARBP2Q15633 366 aaKnown RBP10.51□□□□□ -0.73
YBX3-215ENST00000544504 MTERF2Q49AM1 385 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 GNASQ5JWF2 1037 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 FAM26FQ5R3K3 315 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 TMEM63BQ5T3F8 832 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 PPP2R2DQ66LE6 453 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 PLA2G4FQ68DD2 849 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 IFT74Q96LB3 600 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 GLT1D1Q96MS3 346 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 REEP2Q9BRK0 252 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 C16orf70Q9BSU1 422 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 MTG1Q9BT17 334 aaPredicted RBP10.51□□□□□ -0.73
YBX3-215ENST00000544504 ZHX3Q9H4I2 956 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 DHX33Q9H6R0 707 aaKnown RBP10.51□□□□□ -0.73
YBX3-215ENST00000544504 IL23AQ9NPF7 189 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 C11orf16Q9NQ32 467 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 YBX2Q9Y2T7 364 aaKnown RBP10.51□□□□□ -0.73
YBX3-215ENST00000544504 PHLPP2Q6ZVD8 1323 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 SYNRGQ9UMZ2 1314 aa10.51□□□□□ -0.73
YBX3-215ENST00000544504 A0A087WWV3 80 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 SMTNL1A8MU46 457 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 ZBTB39O15060 712 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 TLL1O43897 1013 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 MAFO75444 373 aaPredicted RBP10.5□□□□□ -0.73
YBX3-215ENST00000544504 FGBP02675 491 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 RPLP2P05387 115 aaKnown RBP10.5□□□□□ -0.73
YBX3-215ENST00000544504 MYL3P08590 195 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 ZNF286BP0CG31 522 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 PLS3P13797 630 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 POU3F3P20264 500 aaPredicted RBP10.5□□□□□ -0.73
YBX3-215ENST00000544504 MARK3P27448 753 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 TMOD1P28289 359 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 ERCC5P28715 1186 aaPredicted RBP10.5□□□□□ -0.73
YBX3-215ENST00000544504 CASP1P29466 404 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 ZNF165P49910 485 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 CDK7P50613 346 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 NPEPPSP55786 919 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 TPM4P67936 248 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 PPFIA1Q13136 1202 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 GSE1Q14687 1217 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 MFSD10Q14728 455 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 EMC2Q15006 297 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 KCNA10Q16322 511 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 ANO6Q4KMQ2 910 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 IER5Q5VY09 327 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 CCSAPQ6IQ19 270 aaPredicted RBP10.5□□□□□ -0.73
YBX3-215ENST00000544504 TRMT1LQ7Z2T5 733 aaKnown RBP10.5□□□□□ -0.73
YBX3-215ENST00000544504 TRIM50Q86XT4 487 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 ZNF710Q8N1W2 664 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 GUF1Q8N442 669 aaKnown RBP10.5□□□□□ -0.73
YBX3-215ENST00000544504 MYCT1Q8N699 235 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 KLHDC9Q8NEP7 349 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 FAM200AQ8TCP9 573 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 ERCC4Q92889 916 aaPredicted RBP10.5□□□□□ -0.73
YBX3-215ENST00000544504 SEZ6LQ9BYH1 1024 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 TELO2Q9Y4R8 837 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 PCDHB13Q9Y5F0 798 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 UBE4BO95155 1302 aa10.5□□□□□ -0.73
YBX3-215ENST00000544504 NRCAMQ92823 1304 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms