RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SMCO2A6NFE2 343 aa13.65□□□□□ -0.23
SMG8-202ENST00000543872 GJB6O95452 261 aa13.65□□□□□ -0.23
SMG8-202ENST00000543872 OATP04181 439 aa13.65□□□□□ -0.23
SMG8-202ENST00000543872 COASYQ13057 564 aa13.65□□□□□ -0.23
SMG8-202ENST00000543872 HERC4Q5GLZ8 1057 aaPredicted RBP13.65□□□□□ -0.23
SMG8-202ENST00000543872 DCAF12L1Q5VU92 463 aa13.65□□□□□ -0.23
SMG8-202ENST00000543872 NEK8Q86SG6 692 aa13.65□□□□□ -0.23
SMG8-202ENST00000543872 TRIM59Q8IWR1 403 aa13.65□□□□□ -0.23
SMG8-202ENST00000543872 KIFAP3Q92845 792 aa13.65□□□□□ -0.23
SMG8-202ENST00000543872 NPHP3-ACAD11A0A0J9YXS1 232 aa13.64□□□□□ -0.23
SMG8-202ENST00000543872 MAPK7Q13164 816 aa13.64□□□□□ -0.23
SMG8-202ENST00000543872 APBB1IPQ7Z5R6 666 aaPredicted RBP13.64□□□□□ -0.23
SMG8-202ENST00000543872 ZC3H18Q86VM9 953 aaKnown RBP13.64□□□□□ -0.23
SMG8-202ENST00000543872 SYCP3Q8IZU3 236 aa13.64□□□□□ -0.23
SMG8-202ENST00000543872 RBM46Q8TBY0 533 aaKnown RBP13.64□□□□□ -0.23
SMG8-202ENST00000543872 SH3RF3Q8TEJ3 882 aaPredicted RBP13.64□□□□□ -0.23
SMG8-202ENST00000543872 HES6Q96HZ4 224 aa13.64□□□□□ -0.23
SMG8-202ENST00000543872 TMEM260Q9NX78 707 aa13.64□□□□□ -0.23
SMG8-202ENST00000543872 DDX3XO00571 662 aaKnown RBP eCLIP13.64□□□□□ -0.233e-6■■■□□ 15.8
SMG8-202ENST00000543872 EXOC3L4Q17RC7 722 aa13.64□□□□□ -0.23
SMG8-202ENST00000543872 GLYCTKQ8IVS8 523 aa13.64□□□□□ -0.23
SMG8-202ENST00000543872 CCDC105Q8IYK2 499 aa13.64□□□□□ -0.23
SMG8-202ENST00000543872 CRAMP1Q96RY5 1269 aa13.64□□□□□ -0.23
SMG8-202ENST00000543872 NAP1L3Q99457 506 aaPredicted RBP13.64□□□□□ -0.23
SMG8-202ENST00000543872 RIOK1Q9BRS2 568 aaKnown RBP13.64□□□□□ -0.23
SMG8-202ENST00000543872 YIPF2Q9BWQ6 316 aa13.64□□□□□ -0.23
SMG8-202ENST00000543872 GRHL1Q9NZI5 618 aa13.64□□□□□ -0.23
SMG8-202ENST00000543872 M0R2N6 131 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 O00370 1275 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 CYTH3O43739 400 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 CBX6O95503 412 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 CALCRLQ16602 461 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 KRT79Q5XKE5 535 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 CCNJLQ8IV13 435 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 ANKLE1Q8NAG6 615 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 TBC1D10AQ9BXI6 508 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 KIAA1683Q9H0B3 1180 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 HDAC9Q9UKV0 1011 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 FER1L4A9Z1Z3 1794 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 GPR75-ASB3A0A0A6YYF3 556 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 ANKRD63C9JTQ0 380 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 NVLO15381 856 aaKnown RBP13.63□□□□□ -0.23
SMG8-202ENST00000543872 AFPP02771 609 aaKnown RBP13.63□□□□□ -0.23
SMG8-202ENST00000543872 KRT18P05783 430 aaKnown RBP13.63□□□□□ -0.23
SMG8-202ENST00000543872 SERPINB4P48594 390 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 SLC35G1Q2M3R5 365 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 VSTM1Q6UX27 236 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 BICDL1Q6ZP65 573 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 SRRM1Q8IYB3 904 aaKnown RBP13.63□□□□□ -0.23
SMG8-202ENST00000543872 PROM2Q8N271 834 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 CKAP2Q8WWK9 683 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 RAD54LQ92698 747 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 DDX50Q9BQ39 737 aaKnown RBP13.63□□□□□ -0.23
SMG8-202ENST00000543872 SH3GLB2Q9NR46 395 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 CHORDC1Q9UHD1 332 aaPredicted RBP13.63□□□□□ -0.23
SMG8-202ENST00000543872 ASB3Q9Y575 518 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 PFASO15067 1338 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 USP17L3A6NCW0 530 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 USP17L4A6NCW7 530 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 FAM187AA6NFU0 413 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 BTNL10A8MVZ5 291 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 CETN3O15182 167 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 ATP6V1G1O75348 118 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 TMEM62Q0P6H9 643 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 LBRQ14739 615 aaKnown RBP13.63□□□□□ -0.23
SMG8-202ENST00000543872 RASIP1Q5U651 963 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 USP17L1Q7RTZ2 530 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 DTX3LQ8TDB6 740 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 LRRC8CQ8TDW0 803 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 UBE2OQ9C0C9 1292 aaKnown RBP13.63□□□□□ -0.23
SMG8-202ENST00000543872 BMP2KQ9NSY1 1161 aaPredicted RBP13.63□□□□□ -0.23
SMG8-202ENST00000543872 NKIRAS1Q9NYS0 192 aa13.63□□□□□ -0.23
SMG8-202ENST00000543872 CNOT7Q9UIV1 285 aaKnown RBP13.63□□□□□ -0.23
SMG8-202ENST00000543872 NR2F2P24468 414 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 ERFP50548 548 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 COBLL1Q53SF7 1204 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 CGB2Q6NT52 195 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 KRT25Q7Z3Z0 450 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 SLFN11Q7Z7L1 901 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 CROCCP2Q86T23 111 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 ASAP3Q8TDY4 903 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 ALG3Q92685 438 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 GBP5Q96PP8 586 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 POP1Q99575 1024 aaKnown RBP13.62□□□□□ -0.23
SMG8-202ENST00000543872 BARHL2Q9NY43 387 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 AJAP1Q9UKB5 411 aaPredicted RBP13.62□□□□□ -0.23
SMG8-202ENST00000543872 JAG2Q9Y219 1238 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 TJP1Q07157 1748 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 CCNB1P14635 433 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 TMEM266Q2M3C6 531 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 SPDYCQ5MJ68 293 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 TRIM42Q8IWZ5 723 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 CTNNBL1Q8WYA6 563 aaPredicted RBP13.62□□□□□ -0.23
SMG8-202ENST00000543872 ANKRD27Q96NW4 1050 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 LRRC37BQ96QE4 947 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 UBA5Q9GZZ9 404 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
SMG8-202ENST00000543872 DENND2DQ9H6A0 471 aaPredicted RBP13.62□□□□□ -0.23
SMG8-202ENST00000543872 NMRK1Q9NWW6 199 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 BZW2Q9Y6E2 419 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms