RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 DDX3XO00571 662 aaKnown RBP eCLIP15.15■□□□□ 0.023e-14■□□□□ 9.2
MSH2-206ENST00000543555 FDX1P10109 184 aa15.15■□□□□ 0.02
MSH2-206ENST00000543555 MYL7Q01449 175 aa15.15■□□□□ 0.02
MSH2-206ENST00000543555 IFI16Q16666 785 aaKnown RBP15.15■□□□□ 0.02
MSH2-206ENST00000543555 C4orf19Q8IY42 314 aa15.15■□□□□ 0.02
MSH2-206ENST00000543555 PACSIN2Q9UNF0 486 aaPredicted RBP15.15■□□□□ 0.02
MSH2-206ENST00000543555 MYH11P35749 1972 aa15.15■□□□□ 0.02
MSH2-206ENST00000543555 VWA5AO00534 786 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 ATP9AO75110 1047 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 DNA2P51530 1060 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 DRAP1Q14919 205 aaPredicted RBP15.14■□□□□ 0.01
MSH2-206ENST00000543555 UGCGQ16739 394 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 NSMFQ6X4W1 530 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 DNAAF5Q86Y56 855 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 RDH13Q8NBN7 331 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 TMEM174Q8WUU8 243 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 ATG4CQ96DT6 458 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 ACCSQ96QU6 501 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 SELENOOQ9BVL4 669 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 APEX2Q9UBZ4 518 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 GRIN3BO60391 1043 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 CCDC102AQ96A19 550 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 CCDC43Q96MW1 224 aaKnown RBP15.14■□□□□ 0.01
MSH2-206ENST00000543555 INPP4AQ96PE3 977 aaPredicted RBP15.14■□□□□ 0.01
MSH2-206ENST00000543555 INTUQ9ULD6 942 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 HPCAL4Q9UM19 191 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 DAAM1Q9Y4D1 1078 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 WDR64B1ANS9 1081 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 H2AFZP0C0S5 128 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 KRT13P13646 458 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 NOP2P46087 812 aaKnown RBP15.14■□□□□ 0.01
MSH2-206ENST00000543555 JAK3P52333 1124 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 GYS2P54840 703 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 HSP90B2PQ58FF3 399 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 ARHGEF16Q5VV41 709 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 C8orf74Q6P047 294 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 H2AFVQ71UI9 128 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 C12orf56Q8IXR9 622 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 OLIG1Q8TAK6 271 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 AENQ8WTP8 325 aaKnown RBP15.14■□□□□ 0.01
MSH2-206ENST00000543555 ZBTB9Q96C00 473 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 WNK4Q96J92 1243 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 TIPINQ9BVW5 301 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 GPR88Q9GZN0 384 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 MED4Q9NPJ6 270 aa15.14■□□□□ 0.01
MSH2-206ENST00000543555 POLR2AP24928 1970 aaKnown RBP15.13■□□□□ 0.01
MSH2-206ENST00000543555 TMEM150BA6NC51 233 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 TISP43B9A030 160 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 BACH1O14867 736 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 CCNE2O96020 404 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 AARSP49588 968 aaKnown RBP eCLIP15.13■□□□□ 0.01
MSH2-206ENST00000543555 BACE1P56817 501 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 PSMC5P62195 406 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 SLC7A5Q01650 507 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 GLE1Q53GS7 698 aaKnown RBP15.13■□□□□ 0.01
MSH2-206ENST00000543555 DCAF15Q66K64 600 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 INTS8Q75QN2 995 aaKnown RBP15.13■□□□□ 0.01
MSH2-206ENST00000543555 SCYL3Q8IZE3 742 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 LRRC57Q8N9N7 239 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 LNX1Q8TBB1 728 aaPredicted RBP15.13■□□□□ 0.01
MSH2-206ENST00000543555 FAM71BQ8TC56 605 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 U2AF1L4Q8WU68 220 aaKnown RBP15.13■□□□□ 0.01
MSH2-206ENST00000543555 HINFPQ9BQA5 517 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 SH2D3AQ9BRG2 576 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 ST6GALNAC4Q9H4F1 302 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 PCIF1Q9H4Z3 704 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 RNF146Q9NTX7 359 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 STIM2Q9P246 746 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 VPS18Q9P253 973 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 ADAM21Q9UKJ8 722 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 CLEC11AQ9Y240 323 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 RIPK3Q9Y572 518 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 A0A0A6YYK5 440 aaPredicted RBP15.13■□□□□ 0.01
MSH2-206ENST00000543555 TESPA1A2RU30 521 aaPredicted RBP15.13■□□□□ 0.01
MSH2-206ENST00000543555 SFNP31947 248 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 MRPS25P82663 173 aaKnown RBP15.13■□□□□ 0.01
MSH2-206ENST00000543555 KRT76Q01546 638 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 RPS6KA1Q15418 735 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 SLC30A5Q8TAD4 765 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 GDAP1L1Q96MZ0 367 aa15.13■□□□□ 0.01
MSH2-206ENST00000543555 DOCK1Q14185 1865 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 A0A0U1RQG5 324 aaPredicted RBP15.12■□□□□ 0.01
MSH2-206ENST00000543555 CES2O00748 559 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 GTF2BQ00403 316 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 BAATQ14032 418 aaPredicted RBP15.12■□□□□ 0.01
MSH2-206ENST00000543555 MOB2Q70IA6 237 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 HAUS6Q7Z4H7 955 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 FMNL3Q8IVF7 1028 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 TPCN2Q8NHX9 752 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 TAF4BQ92750 862 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 CBWD1Q9BRT8 395 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 TCEAL9Q9UHQ7 104 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 FAN1Q9Y2M0 1017 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 ZC3H4Q9UPT8 1303 aaKnown RBP15.12■□□□□ 0.01
MSH2-206ENST00000543555 KIF4AO95239 1232 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 RFX1P22670 979 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 DLG4P78352 724 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 XRRA1Q6P2D8 792 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 ZNF280CQ8ND82 737 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 LMO3Q8TAP4 145 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms