RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	LENG9	Q96B70	501 aa		13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	AZI2	Q9H6S1	392 aa		13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	TAS2R14	Q9NYV8	317 aa		13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	RGL1	Q9NZL6	768 aa		13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	STK24	Q9Y6E0	443 aa		13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	CCT8L1P	A6NM43	557 aa		13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	RGS16	O15492	202 aa	Predicted RBP	13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	HLA-DOA	P06340	250 aa		13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	TRAPPC3L	Q5T215	181 aa		13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	MYCT1	Q8N699	235 aa		13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	ANKS4B	Q8N8V4	417 aa		13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	OLFML3	Q9NRN5	406 aa		13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	MCM8	Q9UJA3	840 aa		13.99	□□□□□ -0.17
DDX11-223	ENST00000542838	ZMYM2	Q9UBW7	1377 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	C10orf71	Q711Q0	1435 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	OPLAH	O14841	1288 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	KIAA0391	O15091	583 aa	Known RBP	13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	DNAJC8	O75937	253 aa	Predicted RBP	13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	GAP43	P17677	238 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	POLD1	P28340	1107 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	MAPK7	Q13164	816 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	SLC29A2	Q14542	456 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	WLS	Q5T9L3	541 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	MSL1	Q68DK7	614 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	RINT1	Q6NUQ1	792 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	AADACL2	Q6P093	401 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	ZDHHC24	Q6UX98	284 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	KSR1	Q8IVT5	923 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	PIGO	Q8TEQ8	1089 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	ALG3	Q92685	438 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	PGM2	Q96G03	612 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	FAM20A	Q96MK3	541 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	TACO1	Q9BSH4	297 aa	Known RBP	13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	ANKRD62	A6NC57	917 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	RIMBP2	O15034	1052 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	MSH4	O15457	936 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	MMP13	P45452	471 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	COG2	Q14746	738 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	USH1G	Q495M9	461 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	CBWD6	Q4V339	395 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	CBWD3	Q5JTY5	395 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	CBWD5	Q5RIA9	395 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	SLFN13	Q68D06	897 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	TAX1BP1	Q86VP1	789 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	UHMK1	Q8TAS1	419 aa	Known RBP	13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	C18orf8	Q96DM3	657 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	RBM17	Q96I25	401 aa	Known RBP	13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	SYT11	Q9BT88	431 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	GPR88	Q9GZN0	384 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	COG5	Q9UP83	839 aa		13.98	□□□□□ -0.17
DDX11-223	ENST00000542838	EML1	O00423	815 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	EIF3D	O15371	548 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	TRIM49	P0CI25	452 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	TRIM49C	P0CI26	452 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	NF2	P35240	595 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	CLUL1	Q15846	466 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	PALB2	Q86YC2	1186 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	INTS2	Q9H0H0	1204 aa	Known RBP	13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	ODF2L	Q9ULJ1	636 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	ALG6	Q9Y672	507 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	PPIP5K2	O43314	1243 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	EEF2	P13639	858 aa	Known RBP	13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	VCAM1	P19320	739 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	ZNF76	P36508	570 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	SCNN1D	P51172	638 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	CYP2J2	P51589	502 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	DRG2	P55039	364 aa	Known RBP	13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	IFI35	P80217	286 aa	Predicted RBP	13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	CTTN	Q14247	550 aa	Known RBP	13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	LRRC34	Q8IZ02	419 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	ADAM7	Q9H2U9	754 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	INTS9	Q9NV88	658 aa	Known RBP	13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	VAV3	Q9UKW4	847 aa		13.97	□□□□□ -0.17
DDX11-223	ENST00000542838	ASAP2	O43150	1006 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	PHF2	O75151	1096 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	E2F5	Q15329	346 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	CYP2W1	Q8TAV3	490 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	DCAF4	Q8WV16	495 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	AMN	Q9BXJ7	453 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	SEMA4A	Q9H3S1	761 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	APEX2	Q9UBZ4	518 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	FRMD4B	Q9Y2L6	1034 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	TMEM110-MUSTN1	A8MSY1	372 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	LRRN2	O75325	713 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	SREBF1	P36956	1147 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	PTGIR	P43119	386 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	C6orf118	Q5T5N4	469 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	RHOT2	Q8IXI1	618 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	PRMT1	Q99873	361 aa	Known RBP	13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	MKNK1	Q9BUB5	465 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	GRHL1	Q9NZI5	618 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	SAMD15	Q9P1V8	674 aa		13.96	□□□□□ -0.17
DDX11-223	ENST00000542838	CTTNBP2NL	Q9P2B4	639 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms