RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 NTPCRQ9BSD7 190 aaKnown RBP25.53■■□□□ 1.68
HOMER3-205ENST00000542541 NLRP11P59045 1033 aaKnown RBP25.52■■□□□ 1.68
HOMER3-205ENST00000542541 COASYQ13057 564 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 PSMD2Q13200 908 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 KMT5BQ4FZB7 885 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 ZNF410Q86VK4 478 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 GTPBP4Q9BZE4 634 aaKnown RBP25.52■■□□□ 1.68
HOMER3-205ENST00000542541 OLFML3Q9NRN5 406 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 TMEM63CQ9P1W3 806 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 CCDC169A6NNP5 214 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 H0YCG3 227 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 KLRC4O43908 158 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 SRGAP2CP0DJJ0 459 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 SCP2P22307 547 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 SARSP49591 514 aaKnown RBP25.52■■□□□ 1.68
HOMER3-205ENST00000542541 MRPS6P82932 125 aaKnown RBP25.52■■□□□ 1.68
HOMER3-205ENST00000542541 FAAP100Q0VG06 881 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 NT5DC1Q5TFE4 455 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 SFR1Q86XK3 245 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 FAM178BQ8IXR5 827 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 RNF149Q8NC42 400 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 DHX38Q92620 1227 aaKnown RBP25.52■■□□□ 1.68
HOMER3-205ENST00000542541 ERCC4Q92889 916 aaPredicted RBP25.52■■□□□ 1.68
HOMER3-205ENST00000542541 NLRP4Q96MN2 994 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 SCLT1Q96NL6 688 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 HTATIP2Q9BUP3 242 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 KMT5AQ9NQR1 393 aa25.52■■□□□ 1.68
HOMER3-205ENST00000542541 LRRIQ4A6NIV6 560 aa25.51■■□□□ 1.67
HOMER3-205ENST00000542541 MAPTP10636 758 aaKnown RBP25.51■■□□□ 1.67
HOMER3-205ENST00000542541 NPTX2P47972 431 aa25.51■■□□□ 1.67
HOMER3-205ENST00000542541 GPC3P51654 580 aa25.51■■□□□ 1.67
HOMER3-205ENST00000542541 TRIM71Q2Q1W2 868 aaKnown RBP25.51■■□□□ 1.67
HOMER3-205ENST00000542541 KSR1Q8IVT5 923 aa25.51■■□□□ 1.67
HOMER3-205ENST00000542541 DEPTORQ8TB45 409 aa25.51■■□□□ 1.67
HOMER3-205ENST00000542541 NLRP7Q8WX94 980 aa25.51■■□□□ 1.67
HOMER3-205ENST00000542541 BSNDQ8WZ55 320 aa25.51■■□□□ 1.67
HOMER3-205ENST00000542541 RHOBTB3O94955 611 aa25.5■■□□□ 1.67
HOMER3-205ENST00000542541 LETM1O95202 739 aaPredicted RBP25.5■■□□□ 1.67
HOMER3-205ENST00000542541 CLTBP09497 229 aa25.5■■□□□ 1.67
HOMER3-205ENST00000542541 ABCD1P33897 745 aa25.5■■□□□ 1.67
HOMER3-205ENST00000542541 RBL2Q08999 1139 aa25.5■■□□□ 1.67
HOMER3-205ENST00000542541 TMEM62Q0P6H9 643 aa25.5■■□□□ 1.67
HOMER3-205ENST00000542541 CAPSQ13938 189 aa25.5■■□□□ 1.67
HOMER3-205ENST00000542541 FAM26FQ5R3K3 315 aa25.5■■□□□ 1.67
HOMER3-205ENST00000542541 WNT8BQ93098 351 aa25.5■■□□□ 1.67
HOMER3-205ENST00000542541 CELF4Q9BZC1 486 aaKnown RBP25.5■■□□□ 1.67
HOMER3-205ENST00000542541 C2orf40Q9H1Z8 148 aa25.5■■□□□ 1.67
HOMER3-205ENST00000542541 MRPL44Q9H9J2 332 aaKnown RBP25.5■■□□□ 1.67
HOMER3-205ENST00000542541 TMEM39AQ9NV64 488 aa25.5■■□□□ 1.67
HOMER3-205ENST00000542541 TRIP12Q14669 1992 aaPredicted RBP25.49■■□□□ 1.67
HOMER3-205ENST00000542541 PITPNM1O00562 1244 aa25.49■■□□□ 1.67
HOMER3-205ENST00000542541 GPR32O75388 356 aa25.49■■□□□ 1.67
HOMER3-205ENST00000542541 PHKA2P46019 1235 aa25.49■■□□□ 1.67
HOMER3-205ENST00000542541 EHHADHQ08426 723 aa25.49■■□□□ 1.67
HOMER3-205ENST00000542541 KIZQ2M2Z5 673 aa25.49■■□□□ 1.67
HOMER3-205ENST00000542541 NFKBIZQ9BYH8 718 aa25.49■■□□□ 1.67
HOMER3-205ENST00000542541 GINS2Q9Y248 185 aa25.49■■□□□ 1.67
HOMER3-205ENST00000542541 TRPV2Q9Y5S1 764 aa25.49■■□□□ 1.67
HOMER3-205ENST00000542541 ALPK3Q96L96 1907 aa25.49■■□□□ 1.67
HOMER3-205ENST00000542541 CKBP12277 381 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 EFNA5P52803 228 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 CRYBB1P53674 252 aaPredicted RBP25.48■■□□□ 1.67
HOMER3-205ENST00000542541 RBM43Q6ZSC3 357 aaKnown RBP25.48■■□□□ 1.67
HOMER3-205ENST00000542541 STXBP4Q6ZWJ1 553 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 ZBTB8OSQ8IWT0 167 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 TRIML1Q8N9V2 468 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 GCOM2Q9BZD3 368 aaPredicted RBP25.48■■□□□ 1.67
HOMER3-205ENST00000542541 INO80BQ9C086 356 aaPredicted RBP25.48■■□□□ 1.67
HOMER3-205ENST00000542541 ADAMTS10Q9H324 1103 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 PHLPP2Q6ZVD8 1323 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 EVPLQ92817 2033 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 A0A087WZ62 844 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 PTENP60484 403 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 ALCAMQ13740 583 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 FAM26DQ5JW98 314 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 ZNF720Q7Z2F6 126 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 PPP1R16BQ96T49 567 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 FDXACB1Q9BRP7 624 aaPredicted RBP25.48■■□□□ 1.67
HOMER3-205ENST00000542541 HIPK3Q9H422 1215 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 TBC1D7Q9P0N9 293 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 CDY2AQ9Y6F7 541 aa25.48■■□□□ 1.67
HOMER3-205ENST00000542541 SLC16A4O15374 487 aa25.47■■□□□ 1.67
HOMER3-205ENST00000542541 SELPP16109 830 aa25.47■■□□□ 1.67
HOMER3-205ENST00000542541 NCKAP1LP55160 1127 aa25.47■■□□□ 1.67
HOMER3-205ENST00000542541 ZNF618Q5T7W0 954 aa25.47■■□□□ 1.67
HOMER3-205ENST00000542541 HAUS6Q7Z4H7 955 aa25.47■■□□□ 1.67
HOMER3-205ENST00000542541 SRGAP1Q7Z6B7 1085 aa25.47■■□□□ 1.67
HOMER3-205ENST00000542541 IFNLR1Q8IU57 520 aaPredicted RBP25.47■■□□□ 1.67
HOMER3-205ENST00000542541 NOC4LQ9BVI4 516 aaKnown RBP25.47■■□□□ 1.67
HOMER3-205ENST00000542541 ST6GALNAC4Q9H4F1 302 aa25.47■■□□□ 1.67
HOMER3-205ENST00000542541 IFT122Q9HBG6 1241 aa25.47■■□□□ 1.67
HOMER3-205ENST00000542541 MAN1B1Q9UKM7 699 aa25.47■■□□□ 1.67
HOMER3-205ENST00000542541 TBX21Q9UL17 535 aa25.47■■□□□ 1.67
HOMER3-205ENST00000542541 PCDHB13Q9Y5F0 798 aa25.47■■□□□ 1.67
HOMER3-205ENST00000542541 K7ENM7 598 aa25.46■■□□□ 1.67
HOMER3-205ENST00000542541 CHRNA1P02708 482 aa25.46■■□□□ 1.67
HOMER3-205ENST00000542541 CTSHP09668 335 aa25.46■■□□□ 1.67
HOMER3-205ENST00000542541 CDCA2Q69YH5 1023 aaPredicted RBP25.46■■□□□ 1.67
HOMER3-205ENST00000542541 ZNF668Q96K58 619 aaPredicted RBP25.46■■□□□ 1.67
HOMER3-205ENST00000542541 FIZ1Q96SL8 496 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms