RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	TCP11X2	Q5H9J9	407 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	SYT2	Q8N9I0	419 aa	Predicted RBP	13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	MIS12	Q9H081	205 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	RHOBTB3	O94955	611 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	PRKCB	P05771	671 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	CFAP221	Q4G0U5	840 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	METTL23	Q86XA0	190 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	ARRDC4	Q8NCT1	418 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	TRIM58	Q8NG06	486 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	OGFR	Q9NZT2	677 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	PDXK	O00764	312 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	KIAA0391	O15091	583 aa	Known RBP	13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	FER	P16591	822 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	SP3	Q02447	781 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	DPYD	Q12882	1025 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	DGKZ	Q13574	1117 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	LBX2	Q6XYB7	198 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	VSIG10L	Q86VR7	867 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	PCSK9	Q8NBP7	692 aa	Known RBP	13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	TTC16	Q8NEE8	873 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	C12orf42	Q96LP6	360 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	MED10	Q9BTT4	135 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	GCNT4	Q9P109	453 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	C4A	P0C0L4	1744 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	TRIM49B	A6NDI0	452 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	BTBD19	C9JJ37	291 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	KPNA6	O60684	536 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	FUT2	Q10981	343 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	KRT31	Q15323	416 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	EARS2	Q5JPH6	523 aa	Known RBP	13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	ZNF484	Q5JVG2	852 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	BPIFA3	Q9BQP9	254 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	FAM213A	Q9BRX8	229 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	ST7	Q9NRC1	585 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	BZW2	Q9Y6E2	419 aa	Known RBP	13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	MYH3	P11055	1940 aa		13.4	□□□□□ -0.26
ABCB8-222	ENST00000542328	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	MEIS2	O14770	477 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	ACTN4	O43707	911 aa	Known RBP	13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	GRB10	Q13322	594 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	COL9A3	Q14050	684 aa	Predicted RBP	13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	KYAT1	Q16773	422 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	PAIP2	Q9BPZ3	127 aa	Known RBP	13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	UST	Q9Y2C2	406 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	PCDHB4	Q9Y5E5	795 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	SIPA1L3	O60292	1781 aa	Predicted RBP	13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	MED24	O75448	989 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	PTPRO	Q16827	1216 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	FAM110C	Q1W6H9	321 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	C17orf75	Q9HAS0	396 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	NXF1	Q9UBU9	619 aa	Known RBP	13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	FAM86B1	E9PN63	330 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	SOCS7	O14512	581 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	BUB1	O43683	1085 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	FAM86B2	P0C5J1	330 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	CIITA	P33076	1130 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	EFCAB12	Q6NXP0	572 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	VSTM4	Q8IW00	320 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	CYP2W1	Q8TAV3	490 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	AFG1L	Q8WV93	481 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	SNX25	Q9H3E2	840 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	CYP26B1	Q9NR63	512 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	TSKS	Q9UJT2	592 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	AKR1A1	P14550	325 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	SCP2	P22307	547 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	DAAM2	Q86T65	1068 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	C4orf19	Q8IY42	314 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	SYCE1	Q8N0S2	351 aa		13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	AGO2	Q9UKV8	859 aa	Known RBP	13.39	□□□□□ -0.27
ABCB8-222	ENST00000542328	H2AFZ	P0C0S5	128 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	POLR2B	P30876	1174 aa	Known RBP	13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	IQSEC1	Q6DN90	963 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	H2AFV	Q71UI9	128 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	ZNF354C	Q86Y25	554 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	ARFGAP2	Q8N6H7	521 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	PPP1R13B	Q96KQ4	1090 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	PLEKHA4	Q9H4M7	779 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	HIRA	P54198	1017 aa	Predicted RBP	13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	IFT20	Q8IY31	132 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	SLC5A5	Q92911	643 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	CAPNS2	Q96L46	248 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	TINF2	Q9BSI4	451 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	TRIM17	Q9Y577	477 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	TOMM70	O94826	608 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	MAP2K5	Q13163	448 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	ACVR2B	Q13705	512 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	ENGASE	Q8NFI3	743 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	RNF34	Q969K3	372 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	TUBE1	Q9UJT0	475 aa		13.38	□□□□□ -0.27
ABCB8-222	ENST00000542328	ARID5B	Q14865	1188 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	RINT1	Q6NUQ1	792 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	ZNF365	Q70YC5	407 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	GPR142	Q7Z601	462 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	GPD1L	Q8N335	351 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	HVCN1	Q96D96	273 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	SELENOS	Q9BQE4	189 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	MAK16	Q9BXY0	300 aa	Known RBP	13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms