RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 SARSP49591 514 aaKnown RBP10.83□□□□□ -0.68
YBX3-212ENST00000542002 ERVK-21P61565 698 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 CDC42EP1Q00587 391 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 CEBPZQ03701 1054 aaKnown RBP10.83□□□□□ -0.68
YBX3-212ENST00000542002 GRB10Q13322 594 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 FOXD4L5Q5VV16 416 aaPredicted RBP10.83□□□□□ -0.68
YBX3-212ENST00000542002 PADI6Q6TGC4 694 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 USP49Q70CQ1 688 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 SLC24A5Q71RS6 500 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 ZNF410Q86VK4 478 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 EXOC8Q8IYI6 725 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 ZNF710Q8N1W2 664 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 RNF149Q8NC42 400 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 PSPC1Q8WXF1 523 aaKnown RBP10.83□□□□□ -0.68
YBX3-212ENST00000542002 FOXD4L4Q8WXT5 416 aaPredicted RBP10.83□□□□□ -0.68
YBX3-212ENST00000542002 ARNTL2Q8WYA1 636 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 BSNDQ8WZ55 320 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 SCLT1Q96NL6 688 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 YME1L1Q96TA2 773 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 BHMT2Q9H2M3 363 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 ATP6V0A4Q9HBG4 840 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 RNF19AQ9NV58 838 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 MTUS1Q9ULD2 1270 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 EVPLQ92817 2033 aa10.83□□□□□ -0.68
YBX3-212ENST00000542002 ASAP2O43150 1006 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 FGFR1P11362 822 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 ATF7P17544 494 aaPredicted RBP10.82□□□□□ -0.68
YBX3-212ENST00000542002 CYP11B2P19099 503 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 MUTP22033 750 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 MARCKSP29966 332 aaPredicted RBP10.82□□□□□ -0.68
YBX3-212ENST00000542002 PTENP60484 403 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 CAPSQ13938 189 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 SPECC1Q5M775 1068 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 HYIQ5T013 277 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 KRT79Q5XKE5 535 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 HAUS3Q68CZ6 603 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 NPAS4Q8IUM7 802 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 TCP11Q8WWU5 503 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 CLIC6Q96NY7 704 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 USP28Q96RU2 1077 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 POLR3FQ9H1D9 316 aaPredicted RBP10.82□□□□□ -0.68
YBX3-212ENST00000542002 TFIP11Q9UBB9 837 aaKnown RBP10.82□□□□□ -0.68
YBX3-212ENST00000542002 HCSTQ9UBK5 93 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 ZDHHC9Q9Y397 364 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 PCDHB7Q9Y5E2 793 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 PRUNE2Q8WUY3 3088 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 COL4A6Q14031 1691 aa10.82□□□□□ -0.68
YBX3-212ENST00000542002 REV3LO60673 3130 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 ARHGEF35A5YM69 484 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 TTLL13PA6NNM8 815 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 MEIS3P2A8K0S8 358 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 GAS2O43903 313 aaKnown RBP10.81□□□□□ -0.68
YBX3-212ENST00000542002 EYA4O95677 639 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 FOSL2P15408 326 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 MBTD1Q05BQ5 628 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 POU5F1BQ06416 359 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 MXD4Q14582 209 aaPredicted RBP10.81□□□□□ -0.68
YBX3-212ENST00000542002 ZRSR1Q15695 479 aaKnown RBP10.81□□□□□ -0.68
YBX3-212ENST00000542002 AMHR2Q16671 573 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 TMEM119Q4V9L6 283 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 PAN2Q504Q3 1202 aaKnown RBP10.81□□□□□ -0.68
YBX3-212ENST00000542002 EPC2Q52LR7 807 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 UBXN11Q5T124 520 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 LRRC55Q6ZSA7 311 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 C1orf186Q6ZWK4 172 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 SRGAP1Q7Z6B7 1085 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 ZNF598Q86UK7 904 aaKnown RBP10.81□□□□□ -0.68
YBX3-212ENST00000542002 ECHDC2Q86YB7 292 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 DAW1Q8N136 415 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 EPSTI1Q96J88 318 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 TGS1Q96RS0 853 aaKnown RBP10.81□□□□□ -0.68
YBX3-212ENST00000542002 RUSC1Q9BVN2 902 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 RAB34Q9BZG1 259 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 CSRNP2Q9H175 543 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 ZSCAN16Q9H4T2 348 aaPredicted RBP10.81□□□□□ -0.68
YBX3-212ENST00000542002 CHST12Q9NRB3 414 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 C1orf112Q9NSG2 853 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 FBXO2Q9UK22 296 aaPredicted RBP10.81□□□□□ -0.68
YBX3-212ENST00000542002 DNM3Q9UQ16 869 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 USP20Q9Y2K6 914 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 MRPL42Q9Y6G3 142 aaKnown RBP10.81□□□□□ -0.68
YBX3-212ENST00000542002 GBF1Q92538 1859 aa10.81□□□□□ -0.68
YBX3-212ENST00000542002 XIRP2A4UGR9 3374 aa10.8□□□□□ -0.68
YBX3-212ENST00000542002 NPHP3-ACAD11A0A0J9YXS1 232 aa10.8□□□□□ -0.68
YBX3-212ENST00000542002 A0A0U1RQF3 1178 aa10.8□□□□□ -0.68
YBX3-212ENST00000542002 B4GALT5O43286 388 aa10.8□□□□□ -0.68
YBX3-212ENST00000542002 ZSCAN22P10073 491 aaPredicted RBP10.8□□□□□ -0.68
YBX3-212ENST00000542002 ZSCAN20P17040 1043 aaPredicted RBP10.8□□□□□ -0.68
YBX3-212ENST00000542002 IGFBP4P22692 258 aa10.8□□□□□ -0.68
YBX3-212ENST00000542002 SLC12A3P55017 1021 aa10.8□□□□□ -0.68
YBX3-212ENST00000542002 BTG3Q14201 252 aaPredicted RBP10.8□□□□□ -0.68
YBX3-212ENST00000542002 SLC39A14Q15043 492 aa10.8□□□□□ -0.68
YBX3-212ENST00000542002 FOXD4L6Q3SYB3 417 aaPredicted RBP10.8□□□□□ -0.68
YBX3-212ENST00000542002 LONRF3Q496Y0 759 aa10.8□□□□□ -0.68
YBX3-212ENST00000542002 ARSHQ5FYA8 562 aa10.8□□□□□ -0.68
YBX3-212ENST00000542002 CLLU1OSQ5K130 101 aa10.8□□□□□ -0.68
YBX3-212ENST00000542002 ODR4Q5SWX8 454 aa10.8□□□□□ -0.68
YBX3-212ENST00000542002 RINT1Q6NUQ1 792 aa10.8□□□□□ -0.68
YBX3-212ENST00000542002 FOXD4L3Q6VB84 417 aaPredicted RBP10.8□□□□□ -0.68
YBX3-212ENST00000542002 CATSPER4Q7RTX7 472 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms