RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 IFNAR1P17181 557 aa17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 PDIA3P30101 505 aaKnown RBP17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 BCAR1P56945 870 aa17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 CENPQQ7L2Z9 268 aaPredicted RBP17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 KSR1Q8IVT5 923 aa17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 ABI1Q8IZP0 508 aa17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 C12orf76Q8N812 135 aaPredicted RBP17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 TBCKQ8TEA7 893 aa17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 NLRP7Q8WX94 980 aa17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 VN1R3Q9BXE9 311 aa17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 NGRNQ9NPE2 291 aaKnown RBP17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 TSHZ2Q9NRE2 1034 aa17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 SEPT9Q9UHD8 586 aaPredicted RBP17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 MYO10Q9HD67 2058 aa17.44■□□□□ 0.38
CLSTN3-213ENST00000541953 A0A087WZ62 844 aa17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 IGKV6-21A0A0C4DH24 114 aa17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 M0R2N6 131 aa17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 HOXA2O43364 376 aa17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 PPM1AP35813 382 aa17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 TBC1D8BQ0IIM8 1120 aa17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 TOB2Q14106 344 aaPredicted RBP17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 PLA2G4FQ68DD2 849 aa17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 SUGP1Q8IWZ8 645 aaKnown RBP17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 FBXL16Q8N461 479 aa17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 MRPL43Q8N983 215 aaKnown RBP17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 SCLT1Q96NL6 688 aa17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 RIT2Q99578 217 aa17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 FDXACB1Q9BRP7 624 aaPredicted RBP17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 TEKT3Q9BXF9 490 aa17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 RNF216Q9NWF9 866 aaPredicted RBP17.43■□□□□ 0.38
CLSTN3-213ENST00000541953 BRD1O95696 1058 aa17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 EPCAMP16422 314 aa17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 TMOD1P28289 359 aa17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 PHKA2P46019 1235 aa17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 AFF1P51825 1210 aaKnown RBP17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 SMC1AQ14683 1233 aaKnown RBP17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 MCTP2Q6DN12 878 aa17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 FAM43BQ6ZT52 329 aaPredicted RBP17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 ZNF579Q8NAF0 562 aaKnown RBP17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 CCDC148Q8NFR7 591 aa17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 ETNPPLQ8TBG4 499 aa17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 ZBP1Q9H171 429 aa17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 NRBP2Q9NSY0 501 aa17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 DNAJB4Q9UDY4 337 aa17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 PUF60Q9UHX1 559 aaKnown RBP17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 ZFHX2Q9C0A1 2572 aaPredicted RBP17.42■□□□□ 0.38
CLSTN3-213ENST00000541953 C2orf16Q68DN1 1984 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 EML1O00423 815 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 SLC37A4O43826 429 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 ZC3H11AO75152 810 aaKnown RBP eCLIP17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 ASGR2P07307 311 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 SFNP31947 248 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 USP11P51784 963 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 JAK3P52333 1124 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 PTPN5P54829 565 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 EVCP57679 992 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 Q4G0T1 1027 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 RARS2Q5T160 578 aaKnown RBP17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 ANO5Q75V66 913 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 MIER3Q7Z3K6 550 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 KREMEN2Q8NCW0 462 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 BICD2Q8TD16 824 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 NIFKQ9BYG3 293 aaKnown RBP17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 TBC1D13Q9NVG8 400 aa17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 WRAP73Q9P2S5 460 aaPredicted RBP17.41■□□□□ 0.38
CLSTN3-213ENST00000541953 ARID2Q68CP9 1835 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 CYP3A7-CYP3A51PA0A087WV96 503 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 FSD2A1L4K1 749 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 EOMESO95936 686 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 SRGAP2BP0DMP2 458 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 HOXB8P17481 243 aaPredicted RBP17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 CYP3A7P24462 503 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 AVPR2P30518 371 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 CA8P35219 290 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 NLRP5P59047 1200 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 AKAP17AQ02040 695 aaKnown RBP17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 KRT17Q04695 432 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 VPS52Q8N1B4 723 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 CASP10Q92851 521 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 MBOAT7Q96N66 472 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 ADAM7Q9H2U9 754 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 NRDE2Q9H7Z3 1164 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 PCDHA4Q9UN74 947 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 PIN4Q9Y237 131 aaKnown RBP17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 INPP5FQ9Y2H2 1132 aa17.4■□□□□ 0.38
CLSTN3-213ENST00000541953 CXCL14O95715 111 aa17.39■□□□□ 0.37
CLSTN3-213ENST00000541953 XKR3Q5GH77 459 aa17.39■□□□□ 0.37
CLSTN3-213ENST00000541953 TWF2Q6IBS0 349 aaKnown RBP17.39■□□□□ 0.37
CLSTN3-213ENST00000541953 ZNF280BQ86YH2 543 aa17.39■□□□□ 0.37
CLSTN3-213ENST00000541953 RHPN2Q8IUC4 686 aa17.39■□□□□ 0.37
CLSTN3-213ENST00000541953 GCOM2Q9BZD3 368 aaPredicted RBP17.39■□□□□ 0.37
CLSTN3-213ENST00000541953 MINDY3Q9H8M7 445 aa17.39■□□□□ 0.37
CLSTN3-213ENST00000541953 BMP2KQ9NSY1 1161 aaPredicted RBP17.39■□□□□ 0.37
CLSTN3-213ENST00000541953 SUCLA2Q9P2R7 463 aaPredicted RBP17.39■□□□□ 0.37
CLSTN3-213ENST00000541953 MAFO75444 373 aaPredicted RBP17.38■□□□□ 0.37
CLSTN3-213ENST00000541953 GALTP07902 379 aa17.38■□□□□ 0.37
CLSTN3-213ENST00000541953 SLC11A1P49279 550 aa17.38■□□□□ 0.37
CLSTN3-213ENST00000541953 NPEPPSP55786 919 aa17.38■□□□□ 0.37
CLSTN3-213ENST00000541953 ZBTB33Q86T24 672 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms