RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 KIAA2012Q0VF49 1180 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 GCKRQ14397 625 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 ACBD5Q5T8D3 534 aaPredicted RBP7.18□□□□□ -1.26
SUDS3-202ENST00000541280 LCE5AQ5TCM9 118 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 ZNF227Q86WZ6 799 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 RIOX2Q8IUF8 465 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 ANKRD18AQ8IVF6 992 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 SYT8Q8NBV8 401 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 BTN2A2Q8WVV5 523 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 BCAS3Q9H6U6 928 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 PODXL2Q9NZ53 605 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 HACL1Q9UJ83 578 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 HDAC5Q9UQL6 1122 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 KIF13BQ9NQT8 1826 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 B2RBV5 119 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 TCERG1O14776 1098 aaKnown RBP7.17□□□□□ -1.26
SUDS3-202ENST00000541280 ITGAVP06756 1048 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 ETFBP38117 255 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 IGHMBP2P38935 993 aaKnown RBP7.17□□□□□ -1.26
SUDS3-202ENST00000541280 MMP14P50281 582 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 SLFN5Q08AF3 891 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 KCNAB2Q13303 367 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 FXNQ16595 210 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 ALDH1L2Q3SY69 923 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 MRM1Q6IN84 353 aaKnown RBP7.17□□□□□ -1.26
SUDS3-202ENST00000541280 MIB1Q86YT6 1006 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 LINC00482Q8N8I6 264 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 KREMEN2Q8NCW0 462 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 TTLL11Q8NHH1 800 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 SMARCC2Q8TAQ2 1214 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 USP33Q8TEY7 942 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 CELF1Q92879 486 aaKnown RBP7.17□□□□□ -1.26
SUDS3-202ENST00000541280 CCDC140Q96MF4 163 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 LGR4Q9BXB1 951 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 EPN3Q9H201 632 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 TAF1DQ9H5J8 278 aaPredicted RBP7.17□□□□□ -1.26
SUDS3-202ENST00000541280 MARCH2Q9P0N8 246 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 X6R8D5 127 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 PTPRCP08575 1304 aa7.17□□□□□ -1.26
SUDS3-202ENST00000541280 SCN7AQ01118 1682 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 KDM3BQ7LBC6 1761 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 ARNTLO00327 626 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 TBX1O43435 398 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 CPP00450 1065 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 CSF1RP07333 972 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 EPHX2P34913 555 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 GTF2A2P52657 109 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 ZFYVE27Q5T4F4 411 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 BEND3Q5T5X7 828 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 LARP1BQ659C4 914 aaKnown RBP7.16□□□□□ -1.26
SUDS3-202ENST00000541280 OLFM4Q6UX06 510 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 USP50Q70EL3 339 aaPredicted RBP7.16□□□□□ -1.26
SUDS3-202ENST00000541280 G2E3Q7L622 706 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 CCDC103Q8IW40 242 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 TRMT2AQ8IZ69 625 aaKnown RBP7.16□□□□□ -1.26
SUDS3-202ENST00000541280 SEC14L1Q92503 715 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 DPF2Q92785 391 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 PPP1R14AQ96A00 147 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 MPHOSPH8Q99549 860 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.16□□□□□ -1.26
SUDS3-202ENST00000541280 KRTAP4-11Q9BYQ6 195 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 ANKRD2Q9GZV1 360 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 PCDH18Q9HCL0 1135 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 TIMM13Q9Y5L4 95 aaPredicted RBP7.16□□□□□ -1.26
SUDS3-202ENST00000541280 RTL9Q8NET4 1388 aa7.16□□□□□ -1.26
SUDS3-202ENST00000541280 UTRNP46939 3433 aa7.15□□□□□ -1.26
SUDS3-202ENST00000541280 ANKRD18BA2A2Z9 1011 aa7.15□□□□□ -1.26
SUDS3-202ENST00000541280 H7C1D1 291 aa7.15□□□□□ -1.26
SUDS3-202ENST00000541280 SGSM2O43147 1006 aa7.15□□□□□ -1.26
SUDS3-202ENST00000541280 RPS12P25398 132 aaKnown RBP7.15□□□□□ -1.26
SUDS3-202ENST00000541280 RPL11P62913 178 aaKnown RBP7.15□□□□□ -1.26
SUDS3-202ENST00000541280 SV2CQ496J9 727 aa7.15□□□□□ -1.26
SUDS3-202ENST00000541280 MROH9Q5TGP6 573 aa7.15□□□□□ -1.26
SUDS3-202ENST00000541280 UBE3BQ7Z3V4 1068 aa7.15□□□□□ -1.26
SUDS3-202ENST00000541280 TBC1D16Q8TBP0 767 aa7.15□□□□□ -1.26
SUDS3-202ENST00000541280 MICAL1Q8TDZ2 1067 aa7.15□□□□□ -1.26
SUDS3-202ENST00000541280 AP5M1Q9H0R1 490 aa7.15□□□□□ -1.26
SUDS3-202ENST00000541280 ZNF408Q9H9D4 720 aa7.15□□□□□ -1.26
SUDS3-202ENST00000541280 C9orf78Q9NZ63 289 aaPredicted RBP7.15□□□□□ -1.26
SUDS3-202ENST00000541280 TMEFF2Q9UIK5 374 aaPredicted RBP7.15□□□□□ -1.26
SUDS3-202ENST00000541280 SIT1Q9Y3P8 196 aa7.15□□□□□ -1.26
SUDS3-202ENST00000541280 C22orf46C9J442 243 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 GRM8O00222 908 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 C8BP07358 591 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 XDHP47989 1333 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 GFRA1P56159 465 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 GPSM2P81274 684 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 ARID5AQ03989 594 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 CXCL9Q07325 125 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 IFIT5Q13325 482 aaKnown RBP7.14□□□□□ -1.27
SUDS3-202ENST00000541280 CCDC57Q2TAC2 916 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 MCF2L2Q86YR7 1114 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 TEX2Q8IWB9 1127 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 ZDHHC14Q8IZN3 488 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 CARFQ8N187 725 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 SLC43A3Q8NBI5 491 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 SNED1Q8TER0 1413 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 ARHGAP45Q92619 1136 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 DIO2Q92813 273 aa7.14□□□□□ -1.27
SUDS3-202ENST00000541280 C1orf159Q96HA4 380 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms