RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SKIP12755 728 aa30.24■■■□□ 2.43
CHFR-218ENST00000540963 ADD1P35611 737 aaKnown RBP30.24■■■□□ 2.43
CHFR-218ENST00000540963 PRKCEQ02156 737 aa30.24■■■□□ 2.43
CHFR-218ENST00000540963 TBC1D8BQ0IIM8 1120 aa30.24■■■□□ 2.43
CHFR-218ENST00000540963 ATAT1Q5SQI0 421 aa30.24■■■□□ 2.43
CHFR-218ENST00000540963 TDRD5Q8NAT2 981 aaKnown RBP30.24■■■□□ 2.43
CHFR-218ENST00000540963 ZBP1Q9H171 429 aa30.24■■■□□ 2.43
CHFR-218ENST00000540963 CDH22Q9UJ99 828 aa30.24■■■□□ 2.43
CHFR-218ENST00000540963 PTPRZ1P23471 2315 aaPredicted RBP30.24■■■□□ 2.43
CHFR-218ENST00000540963 NBL1P41271 181 aa30.23■■■□□ 2.43
CHFR-218ENST00000540963 METAP2P50579 478 aaKnown RBP eCLIP30.23■■■□□ 2.43
CHFR-218ENST00000540963 JAK3P52333 1124 aa30.23■■■□□ 2.43
CHFR-218ENST00000540963 ADCK5Q3MIX3 580 aa30.23■■■□□ 2.43
CHFR-218ENST00000540963 VPS52Q8N1B4 723 aa30.23■■■□□ 2.43
CHFR-218ENST00000540963 NLRP7Q8WX94 980 aa30.23■■■□□ 2.43
CHFR-218ENST00000540963 GCOM2Q9BZD3 368 aaPredicted RBP30.23■■■□□ 2.43
CHFR-218ENST00000540963 DENND4AQ7Z401 1863 aa30.23■■■□□ 2.43
CHFR-218ENST00000540963 PRPF3O43395 683 aaKnown RBP30.22■■■□□ 2.43
CHFR-218ENST00000540963 CTSAP10619 480 aa30.22■■■□□ 2.43
CHFR-218ENST00000540963 CLCN5P51795 746 aa30.22■■■□□ 2.43
CHFR-218ENST00000540963 TARBP2Q15633 366 aaKnown RBP30.22■■■□□ 2.43
CHFR-218ENST00000540963 ASTLQ6HA08 431 aaPredicted RBP30.22■■■□□ 2.43
CHFR-218ENST00000540963 DDX53Q86TM3 631 aaKnown RBP30.22■■■□□ 2.43
CHFR-218ENST00000540963 TMEM105Q8N8V8 129 aa30.22■■■□□ 2.43
CHFR-218ENST00000540963 TMEM87AQ8NBN3 555 aa30.22■■■□□ 2.43
CHFR-218ENST00000540963 RDM1Q8NG50 284 aa30.22■■■□□ 2.43
CHFR-218ENST00000540963 STK39Q9UEW8 545 aa30.22■■■□□ 2.43
CHFR-218ENST00000540963 NID2Q14112 1375 aa30.22■■■□□ 2.43
CHFR-218ENST00000540963 MYO15AQ9UKN7 3530 aa30.22■■■□□ 2.43
CHFR-218ENST00000540963 ADAMTS3O15072 1205 aa30.21■■■□□ 2.43
CHFR-218ENST00000540963 PHKA2P46019 1235 aa30.21■■■□□ 2.43
CHFR-218ENST00000540963 USP11P51784 963 aa30.21■■■□□ 2.43
CHFR-218ENST00000540963 BMP2KLQ5H9B9 411 aa30.21■■■□□ 2.43
CHFR-218ENST00000540963 RARS2Q5T160 578 aaKnown RBP30.21■■■□□ 2.43
CHFR-218ENST00000540963 PPFIBP1Q86W92 1011 aa30.21■■■□□ 2.43
CHFR-218ENST00000540963 RASEFQ8IZ41 740 aa30.21■■■□□ 2.43
CHFR-218ENST00000540963 INO80BQ9C086 356 aaPredicted RBP30.21■■■□□ 2.43
CHFR-218ENST00000540963 DBR1Q9UK59 544 aaKnown RBP30.21■■■□□ 2.43
CHFR-218ENST00000540963 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP30.2■■■□□ 2.43
CHFR-218ENST00000540963 NT5C1B-RDH14C9J2C7 533 aa30.2■■■□□ 2.43
CHFR-218ENST00000540963 MSH4O15457 936 aa30.2■■■□□ 2.43
CHFR-218ENST00000540963 SKAP1Q86WV1 359 aa30.2■■■□□ 2.43
CHFR-218ENST00000540963 CCDC148Q8NFR7 591 aa30.2■■■□□ 2.43
CHFR-218ENST00000540963 SLC22A17Q8WUG5 538 aa30.2■■■□□ 2.43
CHFR-218ENST00000540963 IGSF21Q96ID5 467 aa30.2■■■□□ 2.43
CHFR-218ENST00000540963 ZNF668Q96K58 619 aaPredicted RBP30.2■■■□□ 2.43
CHFR-218ENST00000540963 NIFKQ9BYG3 293 aaKnown RBP30.2■■■□□ 2.43
CHFR-218ENST00000540963 GAS7O60861 476 aa30.19■■■□□ 2.42
CHFR-218ENST00000540963 FGFR4P22455 802 aa30.19■■■□□ 2.42
CHFR-218ENST00000540963 SFPQP23246 707 aaKnown RBP eCLIP30.19■■■□□ 2.42
CHFR-218ENST00000540963 CA8P35219 290 aa30.19■■■□□ 2.42
CHFR-218ENST00000540963 FGD1P98174 961 aa30.19■■■□□ 2.42
CHFR-218ENST00000540963 SLC5A5Q92911 643 aa30.19■■■□□ 2.42
CHFR-218ENST00000540963 NAP1L2Q9ULW6 460 aaPredicted RBP30.19■■■□□ 2.42
CHFR-218ENST00000540963 RIF1Q5UIP0 2472 aaKnown RBP30.18■■■□□ 2.42
CHFR-218ENST00000540963 FAM186AA6NE01 2351 aa30.18■■■□□ 2.42
CHFR-218ENST00000540963 ZC3H11AO75152 810 aaKnown RBP eCLIP30.18■■■□□ 2.42
CHFR-218ENST00000540963 DNM2P50570 870 aa30.18■■■□□ 2.42
CHFR-218ENST00000540963 UGCGQ16739 394 aa30.18■■■□□ 2.42
CHFR-218ENST00000540963 GLB1LQ6UWU2 654 aa30.18■■■□□ 2.42
CHFR-218ENST00000540963 ZNF410Q86VK4 478 aa30.18■■■□□ 2.42
CHFR-218ENST00000540963 TEKT3Q9BXF9 490 aa30.18■■■□□ 2.42
CHFR-218ENST00000540963 CYP26B1Q9NR63 512 aa30.18■■■□□ 2.42
CHFR-218ENST00000540963 LIMD1Q9UGP4 676 aa30.18■■■□□ 2.42
CHFR-218ENST00000540963 IGKV6-21A0A0C4DH24 114 aa30.17■■■□□ 2.42
CHFR-218ENST00000540963 ZNF623O75123 536 aa30.17■■■□□ 2.42
CHFR-218ENST00000540963 ASGR2P07307 311 aa30.17■■■□□ 2.42
CHFR-218ENST00000540963 RAB27AP51159 221 aa30.17■■■□□ 2.42
CHFR-218ENST00000540963 AKAP17AQ02040 695 aaKnown RBP30.17■■■□□ 2.42
CHFR-218ENST00000540963 XKR3Q5GH77 459 aa30.17■■■□□ 2.42
CHFR-218ENST00000540963 LRCH2Q5VUJ6 765 aa30.17■■■□□ 2.42
CHFR-218ENST00000540963 ASCL5Q7RTU5 278 aa30.17■■■□□ 2.42
CHFR-218ENST00000540963 CCDC136Q96JN2 1154 aa30.17■■■□□ 2.42
CHFR-218ENST00000540963 MFSD1Q9H3U5 465 aa30.17■■■□□ 2.42
CHFR-218ENST00000540963 PRR23AA6NEV1 266 aa30.16■■■□□ 2.42
CHFR-218ENST00000540963 GALTP07902 379 aa30.16■■■□□ 2.42
CHFR-218ENST00000540963 EPCAMP16422 314 aa30.16■■■□□ 2.42
CHFR-218ENST00000540963 NOMO2Q5JPE7 1267 aa30.16■■■□□ 2.42
CHFR-218ENST00000540963 TWF2Q6IBS0 349 aaKnown RBP30.16■■■□□ 2.42
CHFR-218ENST00000540963 CABP7Q86V35 215 aa30.16■■■□□ 2.42
CHFR-218ENST00000540963 TMEM173Q86WV6 379 aaPredicted RBP30.16■■■□□ 2.42
CHFR-218ENST00000540963 FBXL16Q8N461 479 aa30.16■■■□□ 2.42
CHFR-218ENST00000540963 C12orf76Q8N812 135 aaPredicted RBP30.16■■■□□ 2.42
CHFR-218ENST00000540963 ACSF2Q96CM8 615 aaPredicted RBP30.16■■■□□ 2.42
CHFR-218ENST00000540963 CEP89Q96ST8 783 aa30.16■■■□□ 2.42
CHFR-218ENST00000540963 RNF26Q9BY78 433 aaPredicted RBP30.16■■■□□ 2.42
CHFR-218ENST00000540963 UNC45AQ9H3U1 944 aa30.16■■■□□ 2.42
CHFR-218ENST00000540963 NRDE2Q9H7Z3 1164 aa30.16■■■□□ 2.42
CHFR-218ENST00000540963 SFXN1Q9H9B4 322 aa30.16■■■□□ 2.42
CHFR-218ENST00000540963 TBC1D13Q9NVG8 400 aa30.16■■■□□ 2.42
CHFR-218ENST00000540963 SPTBN4Q9H254 2564 aa30.16■■■□□ 2.42
CHFR-218ENST00000540963 EDIL3O43854 480 aa30.15■■■□□ 2.42
CHFR-218ENST00000540963 WEE2P0C1S8 567 aa30.15■■■□□ 2.42
CHFR-218ENST00000540963 DRP2Q13474 957 aa30.15■■■□□ 2.42
CHFR-218ENST00000540963 SMOC2Q9H3U7 446 aa30.15■■■□□ 2.42
CHFR-218ENST00000540963 FAM105AQ9NUU6 356 aa30.15■■■□□ 2.42
CHFR-218ENST00000540963 VPS13AQ96RL7 3174 aa30.14■■■□□ 2.42
CHFR-218ENST00000540963 A0A087WZ62 844 aa30.14■■■□□ 2.42
CHFR-218ENST00000540963 CSDE1O75534 798 aaKnown RBP30.14■■■□□ 2.42
CHFR-218ENST00000540963 PSMD10O75832 226 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms