RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.17■□□□□ 0.347e-11■□□□□ 9.7
DDB1-218ENST00000540784 IFIH1Q9BYX4 1025 aaKnown RBP17.17■□□□□ 0.34
DDB1-218ENST00000540784 AGO3Q9H9G7 860 aaKnown RBP17.17■□□□□ 0.34
DDB1-218ENST00000540784 KCNG1Q9UIX4 513 aa17.17■□□□□ 0.34
DDB1-218ENST00000540784 PADI3Q9ULW8 664 aa17.17■□□□□ 0.34
DDB1-218ENST00000540784 EVPLQ92817 2033 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 NPHP3-ACAD11A0A0J9YXS1 232 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 SFI1A8K8P3 1242 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 PFKFB1P16118 471 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 CD52P31358 61 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 PHKA2P46019 1235 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 AMPD3Q01432 767 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 PAK2Q13177 524 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 PPP2R5AQ15172 486 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 SHHQ15465 462 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 E2F4Q16254 413 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 SRGAP1Q7Z6B7 1085 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 FSIP1Q8NA03 581 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 TMEM40Q8WWA1 233 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 MRPS27Q92552 414 aaKnown RBP17.16■□□□□ 0.34
DDB1-218ENST00000540784 APBB2Q92870 758 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 LRRC27Q9C0I9 530 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 IFT122Q9HBG6 1241 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 ST3GAL5Q9UNP4 418 aa17.16■□□□□ 0.34
DDB1-218ENST00000540784 FAM237AA0A1B0GTK4 181 aa17.15■□□□□ 0.34
DDB1-218ENST00000540784 ABHD14A-ACY1A0A1B0GW23 586 aa17.15■□□□□ 0.34
DDB1-218ENST00000540784 CSDE1O75534 798 aaKnown RBP17.15■□□□□ 0.34
DDB1-218ENST00000540784 SYKP43405 635 aa17.15■□□□□ 0.34
DDB1-218ENST00000540784 NDUFA8P51970 172 aa17.15■□□□□ 0.34
DDB1-218ENST00000540784 PTENP60484 403 aa17.15■□□□□ 0.34
DDB1-218ENST00000540784 CAPSQ13938 189 aa17.15■□□□□ 0.34
DDB1-218ENST00000540784 GIT2Q14161 759 aa17.15■□□□□ 0.34
DDB1-218ENST00000540784 FAM43BQ6ZT52 329 aaPredicted RBP17.15■□□□□ 0.34
DDB1-218ENST00000540784 CEP57L1Q8IYX8 460 aa17.15■□□□□ 0.34
DDB1-218ENST00000540784 HERVK_113Q902F9 699 aa17.15■□□□□ 0.34
DDB1-218ENST00000540784 MTIF3Q9H2K0 278 aaKnown RBP17.15■□□□□ 0.34
DDB1-218ENST00000540784 C17orf75Q9HAS0 396 aa17.15■□□□□ 0.34
DDB1-218ENST00000540784 USP25Q9UHP3 1055 aa17.15■□□□□ 0.34
DDB1-218ENST00000540784 HPSEQ9Y251 543 aa17.15■□□□□ 0.34
DDB1-218ENST00000540784 PDE4DIPQ5VU43 2346 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 MYMKA6NI61 221 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 LRRIQ4A6NIV6 560 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 CCDC169A6NNP5 214 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 EFCAB14O75071 495 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 NAMPTP43490 491 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 PEX3P56589 373 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 C9orf50Q5SZB4 431 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 DYMQ7RTS9 669 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 FAM228AQ86W67 206 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 DAW1Q8N136 415 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 DEPTORQ8TB45 409 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 BSNDQ8WZ55 320 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 STAMQ92783 540 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 REEP2Q9BRK0 252 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 FTHL17Q9BXU8 183 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 ZHX3Q9H4I2 956 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 ERVK-5Q9HDB9 667 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 KBTBD4Q9NVX7 518 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 SERTAD1Q9UHV2 236 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 ODF2LQ9ULJ1 636 aa17.14■□□□□ 0.33
DDB1-218ENST00000540784 COLQQ9Y215 455 aaPredicted RBP17.14■□□□□ 0.33
DDB1-218ENST00000540784 ZBBXA8MT70 800 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 BAIAP3O94812 1187 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 FAM13AO94988 1023 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 SLFN14P0C7P3 912 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 PLS3P13797 630 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 FGFR4P22455 802 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
DDB1-218ENST00000540784 SMTNP53814 917 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 CACNB1Q02641 598 aaPredicted RBP17.13■□□□□ 0.33
DDB1-218ENST00000540784 NCBP1Q09161 790 aaKnown RBP17.13■□□□□ 0.33
DDB1-218ENST00000540784 MAPK7Q13164 816 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 TCTN1Q2MV58 587 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 LONRF3Q496Y0 759 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 CLEC17AQ6ZS10 378 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 ZBTB8OSQ8IWT0 167 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 TDHQ8IZJ6 230 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 MYCT1Q8N699 235 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 DDX12PQ92771 950 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 RNPC3Q96LT9 517 aaKnown RBP17.13■□□□□ 0.33
DDB1-218ENST00000540784 NFKBIZQ9BYH8 718 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 C2orf40Q9H1Z8 148 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 TNMDQ9H2S6 317 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 PRO3102Q9H379 93 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 MAGEF1Q9HAY2 307 aa17.13■□□□□ 0.33
DDB1-218ENST00000540784 LARSQ9P2J5 1176 aaKnown RBP17.13■□□□□ 0.33
DDB1-218ENST00000540784 LTBP2Q14767 1821 aa17.12■□□□□ 0.33
DDB1-218ENST00000540784 TCHHQ07283 1943 aa17.12■□□□□ 0.33
DDB1-218ENST00000540784 RBAK-RBAKDNI3L0D1 243 aa17.12■□□□□ 0.33
DDB1-218ENST00000540784 INO80B-WBP1J3KQ70 363 aa17.12■□□□□ 0.33
DDB1-218ENST00000540784 ENPP3O14638 875 aa17.12■□□□□ 0.33
DDB1-218ENST00000540784 TBCAO75347 108 aaKnown RBP17.12■□□□□ 0.33
DDB1-218ENST00000540784 PRPF40AO75400 957 aaKnown RBP17.12■□□□□ 0.33
DDB1-218ENST00000540784 ZSCAN20P17040 1043 aaPredicted RBP17.12■□□□□ 0.33
DDB1-218ENST00000540784 NPTX2P47972 431 aa17.12■□□□□ 0.33
DDB1-218ENST00000540784 EFNA5P52803 228 aa17.12■□□□□ 0.33
DDB1-218ENST00000540784 DMP1Q13316 513 aaPredicted RBP17.12■□□□□ 0.33
DDB1-218ENST00000540784 CATSPER4Q7RTX7 472 aa17.12■□□□□ 0.33
DDB1-218ENST00000540784 IFNLR1Q8IU57 520 aaPredicted RBP17.12■□□□□ 0.33
DDB1-218ENST00000540784 TMEM87AQ8NBN3 555 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms