RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, human

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-229	ENST00000540643	SNX12	Q9UMY4	172 aa		13.85	□□□□□ -0.19
SFI1-229	ENST00000540643	ARHGAP26	Q9UNA1	814 aa		13.85	□□□□□ -0.19
SFI1-229	ENST00000540643	IFIT3	O14879	490 aa	Known RBP	13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	CFLAR	O15519	480 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	TBC1D12	O60347	775 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	DLGAP3	O95886	979 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	SLC34A1	Q06495	639 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	WTAP	Q15007	396 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	QPCT	Q16769	361 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	VWA3B	Q502W6	1294 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	HABP4	Q5JVS0	413 aa	Known RBP	13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	WDR45B	Q5MNZ6	344 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	PPP2R3C	Q969Q6	453 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	HSPBAP1	Q96EW2	488 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	TRIM55	Q9BYV6	548 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	FADS3	Q9Y5Q0	445 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	SBNO2	Q9Y2G9	1366 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	LRRC10B	A6NIK2	292 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	GNPAT	O15228	680 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	SPOP	O43791	374 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	CIITA	P33076	1130 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	PPARG	P37231	505 aa	Predicted RBP	13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	MAPK11	Q15759	364 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	KYNU	Q16719	465 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	KIF6	Q6ZMV9	814 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	LINC00301	Q8NCQ3	95 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	HDAC7	Q8WUI4	952 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	PLEKHA5	Q9HAU0	1116 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	VCP	P55072	806 aa	Known RBP	13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	AGBL2	Q5U5Z8	902 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	KIFC2	Q96AC6	838 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	LRRC59	Q96AG4	307 aa	Known RBP	13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	PHF12	Q96QT6	1004 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	RAD21L1	Q9H4I0	556 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	C8orf4	Q9NR00	106 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	EPS15L1	Q9UBC2	864 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	DBR1	Q9UK59	544 aa	Known RBP	13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	AMFR	Q9UKV5	643 aa		13.84	□□□□□ -0.19
SFI1-229	ENST00000540643	PYM1	Q9BRP8	204 aa	Known RBP	13.83	□□□□□ -0.19
SFI1-229	ENST00000540643	MAN1B1	Q9UKM7	699 aa		13.83	□□□□□ -0.19
SFI1-229	ENST00000540643	TMEM98	Q9Y2Y6	226 aa		13.83	□□□□□ -0.19
SFI1-229	ENST00000540643	ATXN2	Q99700	1313 aa	Known RBP	13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	NLRP1	Q9C000	1473 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	POTEB3	A0JP26	581 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	TPPP	O94811	219 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	GSTT2	P0CG29	244 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	GSTT2B	P0CG30	244 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	HSD17B3	P37058	310 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	ARPP19	P56211	112 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	SPARCL1	Q14515	664 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	USH1G	Q495M9	461 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	PDCD4	Q53EL6	469 aa	Known RBP	13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	MDH1B	Q5I0G3	518 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	POTEB	Q6S5H4	581 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	MCF2L2	Q86YR7	1114 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	RAPGEF4	Q8WZA2	1011 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	CNKSR1	Q969H4	720 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	NLRP4	Q96MN2	994 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	DEPDC7	Q96QD5	511 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	MKNK1	Q9BUB5	465 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	SNX25	Q9H3E2	840 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	EHMT1	Q9H9B1	1298 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	SMIM31	A0A1B0GVY4	71 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	ZSCAN5B	A6NJL1	495 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	DNALI1	O14645	258 aa	Predicted RBP	13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	GRK2	P25098	689 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	GRAMD1A	Q96CP6	724 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	VPS50	Q96JG6	964 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	BPIFA3	Q9BQP9	254 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	STRN4	Q9NRL3	753 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	NMRK1	Q9NWW6	199 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	EMC3	Q9P0I2	261 aa		13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	POLR3A	O14802	1390 aa	Predicted RBP	13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.83	□□□□□ -0.2
SFI1-229	ENST00000540643	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	CCRL2	O00421	344 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	KPNA4	O00629	521 aa	Predicted RBP	13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	ASNA1	O43681	348 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	FYN	P06241	537 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	POLR2E	P19388	210 aa	Known RBP	13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	OASL	Q15646	514 aa	Known RBP	13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	PERM1	Q5SV97	790 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	ACAP3	Q96P50	834 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	TMBIM4	Q9HC24	238 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	KIF24	Q5T7B8	1368 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	YWHAG	P61981	247 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	GFPT1	Q06210	699 aa	Predicted RBP	13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	RGS21	Q2M5E4	152 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	LRIG3	Q6UXM1	1119 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	EXOC7	Q9UPT5	735 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	PHF24	Q9UPV7	400 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	COQ6	Q9Y2Z9	468 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	PCDHA13	Q9Y5I0	950 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	FRMPD1	Q5SYB0	1578 aa		13.82	□□□□□ -0.2
SFI1-229	ENST00000540643	FAM83G	A6ND36	823 aa		13.82	□□□□□ -0.2

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