RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 PTCRAQ6ISU1 281 aaPredicted RBP23.45■■□□□ 1.34
CHFR-217ENST00000540537 ZNF579Q8NAF0 562 aaKnown RBP23.45■■□□□ 1.34
CHFR-217ENST00000540537 COLGALT1Q8NBJ5 622 aa23.45■■□□□ 1.34
CHFR-217ENST00000540537 ZSCAN31Q96LW9 406 aaPredicted RBP23.45■■□□□ 1.34
CHFR-217ENST00000540537 CASD1Q96PB1 797 aa23.45■■□□□ 1.34
CHFR-217ENST00000540537 TRAIPQ9BWF2 469 aa23.45■■□□□ 1.34
CHFR-217ENST00000540537 PCDHA12Q9UN75 941 aa23.45■■□□□ 1.34
CHFR-217ENST00000540537 ARID2Q68CP9 1835 aa23.45■■□□□ 1.34
CHFR-217ENST00000540537 H3BQ06 376 aaPredicted RBP23.44■■□□□ 1.34
CHFR-217ENST00000540537 WNT7AO00755 349 aa23.44■■□□□ 1.34
CHFR-217ENST00000540537 GAS2O43903 313 aaKnown RBP23.44■■□□□ 1.34
CHFR-217ENST00000540537 CSPG5O95196 566 aa23.44■■□□□ 1.34
CHFR-217ENST00000540537 EOMESO95936 686 aa23.44■■□□□ 1.34
CHFR-217ENST00000540537 CYP4A11Q02928 519 aa23.44■■□□□ 1.34
CHFR-217ENST00000540537 CTTNQ14247 550 aaKnown RBP23.44■■□□□ 1.34
CHFR-217ENST00000540537 EP400NLQ6ZTU2 488 aa23.44■■□□□ 1.34
CHFR-217ENST00000540537 ZNF598Q86UK7 904 aaKnown RBP23.44■■□□□ 1.34
CHFR-217ENST00000540537 ABI1Q8IZP0 508 aa23.44■■□□□ 1.34
CHFR-217ENST00000540537 NLRP4Q96MN2 994 aa23.44■■□□□ 1.34
CHFR-217ENST00000540537 KIF2CQ99661 725 aa23.44■■□□□ 1.34
CHFR-217ENST00000540537 EIF2AK1Q9BQI3 630 aaKnown RBP23.44■■□□□ 1.34
CHFR-217ENST00000540537 SH2B1Q9NRF2 756 aaPredicted RBP23.44■■□□□ 1.34
CHFR-217ENST00000540537 HCSTQ9UBK5 93 aa23.44■■□□□ 1.34
CHFR-217ENST00000540537 COL4A3BPQ9Y5P4 624 aa23.44■■□□□ 1.34
CHFR-217ENST00000540537 GRXCR2A6NFK2 248 aa23.43■■□□□ 1.34
CHFR-217ENST00000540537 SLITRK3O94933 977 aa23.43■■□□□ 1.34
CHFR-217ENST00000540537 LYPLA2O95372 231 aa23.43■■□□□ 1.34
CHFR-217ENST00000540537 IRS1P35568 1242 aa23.43■■□□□ 1.34
CHFR-217ENST00000540537 LTBRP36941 435 aa23.43■■□□□ 1.34
CHFR-217ENST00000540537 KSR1Q8IVT5 923 aa23.43■■□□□ 1.34
CHFR-217ENST00000540537 LRRC43Q8N309 656 aa23.43■■□□□ 1.34
CHFR-217ENST00000540537 PSPC1Q8WXF1 523 aaKnown RBP23.43■■□□□ 1.34
CHFR-217ENST00000540537 C8orf76Q96K31 380 aa23.43■■□□□ 1.34
CHFR-217ENST00000540537 MTMR9Q96QG7 549 aa23.43■■□□□ 1.34
CHFR-217ENST00000540537 TTC12Q9H892 705 aaPredicted RBP23.43■■□□□ 1.34
CHFR-217ENST00000540537 FGF18O76093 207 aa23.42■■□□□ 1.34
CHFR-217ENST00000540537 ATF7P17544 494 aaPredicted RBP23.42■■□□□ 1.34
CHFR-217ENST00000540537 HMGN5P82970 282 aaKnown RBP23.42■■□□□ 1.34
CHFR-217ENST00000540537 EMC2Q15006 297 aa23.42■■□□□ 1.34
CHFR-217ENST00000540537 XKR9Q5GH70 373 aa23.42■■□□□ 1.34
CHFR-217ENST00000540537 CLLU1OSQ5K130 101 aa23.42■■□□□ 1.34
CHFR-217ENST00000540537 LRRC55Q6ZSA7 311 aa23.42■■□□□ 1.34
CHFR-217ENST00000540537 TPH2Q8IWU9 490 aa23.42■■□□□ 1.34
CHFR-217ENST00000540537 THNSL1Q8IYQ7 743 aa23.42■■□□□ 1.34
CHFR-217ENST00000540537 RNF169Q8NCN4 708 aa23.42■■□□□ 1.34
CHFR-217ENST00000540537 TCP11Q8WWU5 503 aa23.42■■□□□ 1.34
CHFR-217ENST00000540537 PRPF31Q8WWY3 499 aaKnown RBP23.42■■□□□ 1.34
CHFR-217ENST00000540537 RSPH1Q8WYR4 309 aa23.42■■□□□ 1.34
CHFR-217ENST00000540537 HSD17B14Q9BPX1 270 aa23.42■■□□□ 1.34
CHFR-217ENST00000540537 IFT122Q9HBG6 1241 aa23.42■■□□□ 1.34
CHFR-217ENST00000540537 FAM50BQ9Y247 325 aa23.42■■□□□ 1.34
CHFR-217ENST00000540537 SKIP12755 728 aa23.41■■□□□ 1.34
CHFR-217ENST00000540537 IL9P15248 144 aa23.41■■□□□ 1.34
CHFR-217ENST00000540537 PHKA2P46019 1235 aa23.41■■□□□ 1.34
CHFR-217ENST00000540537 GUCY1B3Q02153 619 aa23.41■■□□□ 1.34
CHFR-217ENST00000540537 CATSPER4Q7RTX7 472 aa23.41■■□□□ 1.34
CHFR-217ENST00000540537 SRGAP1Q7Z6B7 1085 aa23.41■■□□□ 1.34
CHFR-217ENST00000540537 FAM178BQ8IXR5 827 aa23.41■■□□□ 1.34
CHFR-217ENST00000540537 TMEM143Q96AN5 459 aa23.41■■□□□ 1.34
CHFR-217ENST00000540537 IGFLR1Q9H665 355 aa23.41■■□□□ 1.34
CHFR-217ENST00000540537 TLR9Q9NR96 1032 aa23.41■■□□□ 1.34
CHFR-217ENST00000540537 PIN4Q9Y237 131 aaKnown RBP23.41■■□□□ 1.34
CHFR-217ENST00000540537 ASAP2O43150 1006 aa23.4■■□□□ 1.34
CHFR-217ENST00000540537 GTF2F1P35269 517 aaKnown RBP eCLIP23.4■■□□□ 1.34
CHFR-217ENST00000540537 TXKP42681 527 aa23.4■■□□□ 1.34
CHFR-217ENST00000540537 RBM25P49756 843 aaKnown RBP23.4■■□□□ 1.34
CHFR-217ENST00000540537 LAMTOR4Q0VGL1 99 aa23.4■■□□□ 1.34
CHFR-217ENST00000540537 ADAM15Q13444 863 aa23.4■■□□□ 1.34
CHFR-217ENST00000540537 TWF2Q6IBS0 349 aaKnown RBP23.4■■□□□ 1.34
CHFR-217ENST00000540537 ADGRD2Q7Z7M1 963 aa23.4■■□□□ 1.34
CHFR-217ENST00000540537 HELQQ8TDG4 1101 aa23.4■■□□□ 1.34
CHFR-217ENST00000540537 MTRQ99707 1265 aa23.4■■□□□ 1.34
CHFR-217ENST00000540537 MRPL9Q9BYD2 267 aaKnown RBP23.4■■□□□ 1.34
CHFR-217ENST00000540537 FOXP1Q9H334 677 aaPredicted RBP23.4■■□□□ 1.34
CHFR-217ENST00000540537 ANKEF1Q9NU02 776 aa23.4■■□□□ 1.34
CHFR-217ENST00000540537 LZTS1Q9Y250 596 aa23.4■■□□□ 1.34
CHFR-217ENST00000540537 ZBTB39O15060 712 aa23.39■■□□□ 1.33
CHFR-217ENST00000540537 PPM1AP35813 382 aa23.39■■□□□ 1.33
CHFR-217ENST00000540537 RAB27AP51159 221 aa23.39■■□□□ 1.33
CHFR-217ENST00000540537 PLCB3Q01970 1234 aa23.39■■□□□ 1.33
CHFR-217ENST00000540537 ORC2Q13416 577 aaPredicted RBP23.39■■□□□ 1.33
CHFR-217ENST00000540537 PDE12Q6L8Q7 609 aaKnown RBP23.39■■□□□ 1.33
CHFR-217ENST00000540537 KCNT2Q6UVM3 1135 aa23.39■■□□□ 1.33
CHFR-217ENST00000540537 FERMT3Q86UX7 667 aa23.39■■□□□ 1.33
CHFR-217ENST00000540537 EFHBQ8N7U6 833 aa23.39■■□□□ 1.33
CHFR-217ENST00000540537 FBXO18Q8NFZ0 1043 aa23.39■■□□□ 1.33
CHFR-217ENST00000540537 ZNF558Q96NG5 402 aa23.39■■□□□ 1.33
CHFR-217ENST00000540537 TMEM60Q9H2L4 133 aa23.39■■□□□ 1.33
CHFR-217ENST00000540537 BMP2KQ9NSY1 1161 aaPredicted RBP23.39■■□□□ 1.33
CHFR-217ENST00000540537 AGPAT5Q9NUQ2 364 aa23.39■■□□□ 1.33
CHFR-217ENST00000540537 FSCN2O14926 492 aa23.38■■□□□ 1.33
CHFR-217ENST00000540537 TBX10O75333 385 aa23.38■■□□□ 1.33
CHFR-217ENST00000540537 SRGAP2CP0DJJ0 459 aa23.38■■□□□ 1.33
CHFR-217ENST00000540537 MCM7P33993 719 aa23.38■■□□□ 1.33
CHFR-217ENST00000540537 DLX2Q07687 328 aaPredicted RBP23.38■■□□□ 1.33
CHFR-217ENST00000540537 MRPS27Q92552 414 aaKnown RBP23.38■■□□□ 1.33
CHFR-217ENST00000540537 XPNPEP1Q9NQW7 623 aa23.38■■□□□ 1.33
CHFR-217ENST00000540537 FAM105AQ9NUU6 356 aa23.38■■□□□ 1.33
CHFR-217ENST00000540537 PCDHGC5Q9Y5F6 944 aa23.38■■□□□ 1.33
CHFR-217ENST00000540537 LINC01565O15544 149 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms