RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 ZNF862O60290 1169 aa14.06□□□□□ -0.16
COPS7A-211ENST00000540408 GFRA3O60609 400 aa14.06□□□□□ -0.16
COPS7A-211ENST00000540408 CLASP2O75122 1294 aaKnown RBP14.06□□□□□ -0.16
COPS7A-211ENST00000540408 SFPQP23246 707 aaKnown RBP eCLIP14.06□□□□□ -0.16
COPS7A-211ENST00000540408 ZNF598Q86UK7 904 aaKnown RBP14.06□□□□□ -0.16
COPS7A-211ENST00000540408 VPS52Q8N1B4 723 aa14.06□□□□□ -0.16
COPS7A-211ENST00000540408 RDM1Q8NG50 284 aa14.06□□□□□ -0.16
COPS7A-211ENST00000540408 BRF1Q92994 677 aa14.06□□□□□ -0.16
COPS7A-211ENST00000540408 RNF26Q9BY78 433 aaPredicted RBP14.06□□□□□ -0.16
COPS7A-211ENST00000540408 POMKQ9H5K3 350 aa14.06□□□□□ -0.16
COPS7A-211ENST00000540408 FAM86C1Q9NVL1 165 aa14.06□□□□□ -0.16
COPS7A-211ENST00000540408 DZANK1Q9NVP4 752 aa14.06□□□□□ -0.16
COPS7A-211ENST00000540408 DBR1Q9UK59 544 aaKnown RBP14.06□□□□□ -0.16
COPS7A-211ENST00000540408 TRIOO75962 3097 aa14.06□□□□□ -0.16
COPS7A-211ENST00000540408 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.05□□□□□ -0.16
COPS7A-211ENST00000540408 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 C2CD4DB7Z1M9 353 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 H0Y858 1186 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 ZC3H11AO75152 810 aaKnown RBP eCLIP14.05□□□□□ -0.16
COPS7A-211ENST00000540408 FGFR4P22455 802 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 PHKA2P46019 1235 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 POLGP54098 1239 aaPredicted RBP14.05□□□□□ -0.16
COPS7A-211ENST00000540408 NLRP5P59047 1200 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 RNASELQ05823 741 aaKnown RBP14.05□□□□□ -0.16
COPS7A-211ENST00000540408 XKR3Q5GH77 459 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 RARS2Q5T160 578 aaKnown RBP14.05□□□□□ -0.16
COPS7A-211ENST00000540408 TWF2Q6IBS0 349 aaKnown RBP14.05□□□□□ -0.16
COPS7A-211ENST00000540408 BLOC1S2Q6QNY1 142 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 GLB1LQ6UWU2 654 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 MIER3Q7Z3K6 550 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 PPFIBP1Q86W92 1011 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 TDRD5Q8NAT2 981 aaKnown RBP14.05□□□□□ -0.16
COPS7A-211ENST00000540408 SLC5A5Q92911 643 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 PHKBQ93100 1093 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 LENG9Q96B70 501 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 MFSD1Q9H3U5 465 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 STK39Q9UEW8 545 aa14.05□□□□□ -0.16
COPS7A-211ENST00000540408 SEPT9Q9UHD8 586 aaPredicted RBP14.05□□□□□ -0.16
COPS7A-211ENST00000540408 ADAMTS3O15072 1205 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 GALR2O43603 387 aaPredicted RBP14.04□□□□□ -0.16
COPS7A-211ENST00000540408 CDC45O75419 566 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 CSDE1O75534 798 aaKnown RBP14.04□□□□□ -0.16
COPS7A-211ENST00000540408 RAB27AP51159 221 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 MTERF2Q49AM1 385 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 DDX53Q86TM3 631 aaKnown RBP14.04□□□□□ -0.16
COPS7A-211ENST00000540408 CABP7Q86V35 215 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 ZNF410Q86VK4 478 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 ZDHHC14Q8IZN3 488 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 ACSF2Q96CM8 615 aaPredicted RBP14.04□□□□□ -0.16
COPS7A-211ENST00000540408 PGBD4Q96DM1 585 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 JAKMIP1Q96N16 626 aaKnown RBP14.04□□□□□ -0.16
COPS7A-211ENST00000540408 JPH2Q9BR39 696 aaPredicted RBP14.04□□□□□ -0.16
COPS7A-211ENST00000540408 TRAIPQ9BWF2 469 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 SLC26A6Q9BXS9 759 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 NIFKQ9BYG3 293 aaKnown RBP14.04□□□□□ -0.16
COPS7A-211ENST00000540408 UNC45AQ9H3U1 944 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 SH3GLB2Q9NR46 395 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 PIN4Q9Y237 131 aaKnown RBP14.04□□□□□ -0.16
COPS7A-211ENST00000540408 USTQ9Y2C2 406 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 IRAK3Q9Y616 596 aa14.04□□□□□ -0.16
COPS7A-211ENST00000540408 A0A087WZ62 844 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 BRD1O95696 1058 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 PDGFBP01127 241 aaPredicted RBP14.03□□□□□ -0.16
COPS7A-211ENST00000540408 CTSAP10619 480 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 CPA1P15085 419 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 PSMA5P28066 241 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 TARBP2Q15633 366 aaKnown RBP14.03□□□□□ -0.16
COPS7A-211ENST00000540408 UGCGQ16739 394 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 NOMO2Q5JPE7 1267 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 KIAA1841Q6NSI8 718 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 CATSPER4Q7RTX7 472 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 RHPN2Q8IUC4 686 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 TRIM22Q8IYM9 498 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 FBXL16Q8N461 479 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 TBCKQ8TEA7 893 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 IGSF21Q96ID5 467 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 FDXACB1Q9BRP7 624 aaPredicted RBP14.03□□□□□ -0.16
COPS7A-211ENST00000540408 ZBP1Q9H171 429 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 VPS54Q9P1Q0 977 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 SUCLA2Q9P2R7 463 aaPredicted RBP14.03□□□□□ -0.16
COPS7A-211ENST00000540408 LIMD1Q9UGP4 676 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 CDH22Q9UJ99 828 aa14.03□□□□□ -0.16
COPS7A-211ENST00000540408 DDX11L8A8MPP1 907 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 PSMD10O75832 226 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 GALTP07902 379 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 WEE2P0C1S8 567 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 IFNAR1P17181 557 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 LONRF3Q496Y0 759 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 Q4G0T1 1027 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 EXOC8Q8IYI6 725 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 C12orf76Q8N812 135 aaPredicted RBP14.02□□□□□ -0.17
COPS7A-211ENST00000540408 URGCPQ8TCY9 931 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 SNX27Q96L92 541 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 FAM193BQ96PV7 902 aaPredicted RBP14.02□□□□□ -0.17
COPS7A-211ENST00000540408 EMILIN2Q9BXX0 1053 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 GBP3Q9H0R5 595 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 CYP26B1Q9NR63 512 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 FAM105AQ9NUU6 356 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 TBC1D13Q9NVG8 400 aa14.02□□□□□ -0.17
COPS7A-211ENST00000540408 INPP5FQ9Y2H2 1132 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms