RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 SARNPP82979 210 aaKnown RBP10.54□□□□□ -0.72
CLIP1-212ENST00000540304 APBA1Q02410 837 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 MYBPC2Q14324 1141 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 SPA17Q15506 151 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 SWT1Q5T5J6 900 aaKnown RBP10.54□□□□□ -0.72
CLIP1-212ENST00000540304 TCERG1LQ5VWI1 586 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 TTC19Q6DKK2 380 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-212ENST00000540304 MOB2Q70IA6 237 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 SLC9A9Q8IVB4 645 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 SLC35C1Q96A29 364 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 CCDC97Q96F63 343 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-212ENST00000540304 GANQ9H2C0 597 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 KDM4CQ9H3R0 1056 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 ST6GALNAC4Q9H4F1 302 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 PLCB1Q9NQ66 1216 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 AGTPBP1Q9UPW5 1226 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 FRMD4BQ9Y2L6 1034 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 MRFAP1Q9Y605 127 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 ZC3H4Q9UPT8 1303 aaKnown RBP10.54□□□□□ -0.72
CLIP1-212ENST00000540304 ICAM3P32942 547 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 CYP2C19P33261 490 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 KIF11P52732 1056 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 NPEPPSP55786 919 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 CNTN2Q02246 1040 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 CCDC122Q5T0U0 273 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 SFMBT2Q5VUG0 894 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 ANO5Q75V66 913 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 SLC35F6Q8N357 371 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 SLC17A8Q8NDX2 589 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 JAKMIP2Q96AA8 810 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 ACCSQ96QU6 501 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 ASCC2Q9H1I8 757 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-212ENST00000540304 DEF6Q9H4E7 631 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 TRIM10Q9UDY6 481 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 LRRC37A2A6NM11 1700 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 GTPBP10A4D1E9 387 aaKnown RBP10.53□□□□□ -0.72
CLIP1-212ENST00000540304 CTAGE9A4FU28 777 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 KRT86O43790 486 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 LCA5LO95447 670 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 EIF4A3P38919 411 aaKnown RBP10.53□□□□□ -0.72
CLIP1-212ENST00000540304 CYP2J2P51589 502 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 ACTR2P61160 394 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 EXOC3L4Q17RC7 722 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 FAM102BQ5T8I3 360 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 MIS18BP1Q6P0N0 1132 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 ARMC9Q7Z3E5 817 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 NCAPG2Q86XI2 1143 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 EHBP1Q8NDI1 1231 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 FAM210AQ96ND0 272 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 GUCA1BQ9UMX6 200 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 SSU72P8A0A1W2PR75 194 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 GLTPD2A6NH11 291 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 AKR1B10O60218 316 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 ZNF862O60290 1169 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 TFRCP02786 760 aaKnown RBP10.53□□□□□ -0.72
CLIP1-212ENST00000540304 SERPING1P05155 500 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 PON1P27169 355 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 VAV2P52735 878 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 NCKAP1LP55160 1127 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 GTF2BQ00403 316 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 SLC9C1Q4G0N8 1177 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 SWSAP1Q6NVH7 229 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 ABHD15Q6UXT9 468 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 GBP6Q6ZN66 633 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 HAUS6Q7Z4H7 955 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 TMEM174Q8WUU8 243 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 OPTNQ96CV9 577 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 CEP170P1Q96L14 293 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 PAGR1Q9BTK6 254 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 TSGA10Q9BZW7 698 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 GPRC5CQ9NQ84 441 aa10.53□□□□□ -0.72
CLIP1-212ENST00000540304 MYH9P35579 1960 aaKnown RBP10.53□□□□□ -0.72
CLIP1-212ENST00000540304 CENPFP49454 3210 aa10.52□□□□□ -0.72
CLIP1-212ENST00000540304 POTEB2H3BUK9 544 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 KIF3CO14782 793 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 ZNF263O14978 683 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 SORBS3O60504 671 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 CNMDO75829 334 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 STBD1O95210 358 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 SLC25A27O95847 323 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 SUPT20HL2P0C7V6 817 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 SLC9A1P19634 815 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 VASPP50552 380 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-212ENST00000540304 PEX3P56589 373 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 SNRPFP62306 86 aaKnown RBP10.52□□□□□ -0.73
CLIP1-212ENST00000540304 CYP27A1Q02318 531 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 SP4Q02446 784 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 TUBB2AQ13885 445 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 KLHDC7AQ5VTJ3 777 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 HGSNATQ68CP4 663 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 DPY19L2P1Q6NXN4 242 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 FASTKD5Q7L8L6 764 aaKnown RBP10.52□□□□□ -0.73
CLIP1-212ENST00000540304 CCDC60Q8IWA6 550 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-212ENST00000540304 C12orf56Q8IXR9 622 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 NAPGQ99747 312 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-212ENST00000540304 TUBB2BQ9BVA1 445 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 CARD6Q9BX69 1037 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 TAF1DQ9H5J8 278 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-212ENST00000540304 ST7Q9NRC1 585 aa10.52□□□□□ -0.73
CLIP1-212ENST00000540304 IGSF9BQ9UPX0 1349 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms