RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 BMP8AQ7Z5Y6 402 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.47□□□□□ -1.05
GNE-205ENST00000539815 ZSCAN30Q86W11 494 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 PALB2Q86YC2 1186 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 PSPC1Q8WXF1 523 aaKnown RBP8.47□□□□□ -1.05
GNE-205ENST00000539815 ANO3Q9BYT9 981 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 NDRG2Q9UN36 371 aaKnown RBP8.47□□□□□ -1.05
GNE-205ENST00000539815 TRAPPC3O43617 180 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 GBP1P32455 592 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 CLCN3P51790 818 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 HTRA4P83105 476 aaPredicted RBP8.47□□□□□ -1.05
GNE-205ENST00000539815 PSMD2Q13200 908 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 BIRC2Q13490 618 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 NOMO2Q5JPE7 1267 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 MRPS23Q9Y3D9 190 aaKnown RBP8.47□□□□□ -1.05
GNE-205ENST00000539815 R4GN57 208 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 MGAMO43451 1857 aa8.46□□□□□ -1.05
GNE-205ENST00000539815 GPR179Q6PRD1 2367 aa8.46□□□□□ -1.05
GNE-205ENST00000539815 RBBP6Q7Z6E9 1792 aaKnown RBP8.46□□□□□ -1.05
GNE-205ENST00000539815 A0A0C4DFX4 3053 aa8.46□□□□□ -1.05
GNE-205ENST00000539815 SPATA31C2B4DYI2 1134 aa8.46□□□□□ -1.05
GNE-205ENST00000539815 IPO5O00410 1097 aaKnown RBP8.46□□□□□ -1.05
GNE-205ENST00000539815 CTAGE5O15320 804 aa8.46□□□□□ -1.05
GNE-205ENST00000539815 FGFR1P11362 822 aa8.46□□□□□ -1.05
GNE-205ENST00000539815 PSMA5P28066 241 aa8.46□□□□□ -1.05
GNE-205ENST00000539815 KPNA1P52294 538 aaPredicted RBP8.46□□□□□ -1.05
GNE-205ENST00000539815 ANGPT1Q15389 498 aa8.46□□□□□ -1.05
GNE-205ENST00000539815 AASDHQ4L235 1098 aaPredicted RBP8.46□□□□□ -1.05
GNE-205ENST00000539815 TBC1D10CQ8IV04 446 aa8.46□□□□□ -1.05
GNE-205ENST00000539815 LRRC71Q8N4P6 559 aa8.46□□□□□ -1.05
GNE-205ENST00000539815 OTUD7AQ8TE49 926 aaPredicted RBP8.46□□□□□ -1.05
GNE-205ENST00000539815 EMID1Q96A84 441 aaPredicted RBP8.46□□□□□ -1.05
GNE-205ENST00000539815 FGD4Q96M96 766 aa8.46□□□□□ -1.05
GNE-205ENST00000539815 KATNBL1Q9H079 304 aa8.46□□□□□ -1.05
GNE-205ENST00000539815 ADAM7Q9H2U9 754 aa8.46□□□□□ -1.05
GNE-205ENST00000539815 BMP2KQ9NSY1 1161 aaPredicted RBP8.46□□□□□ -1.05
GNE-205ENST00000539815 ATRXP46100 2492 aa8.46□□□□□ -1.06
GNE-205ENST00000539815 PHKA2P46019 1235 aa8.46□□□□□ -1.06
GNE-205ENST00000539815 GRM4Q14833 912 aa8.46□□□□□ -1.06
GNE-205ENST00000539815 LRCH2Q5VUJ6 765 aa8.46□□□□□ -1.06
GNE-205ENST00000539815 COLGALT1Q8NBJ5 622 aa8.46□□□□□ -1.06
GNE-205ENST00000539815 DDX1Q92499 740 aaKnown RBP8.46□□□□□ -1.06
GNE-205ENST00000539815 DHX38Q92620 1227 aaKnown RBP8.46□□□□□ -1.06
GNE-205ENST00000539815 PCDHA2Q9Y5H9 948 aa8.46□□□□□ -1.06
GNE-205ENST00000539815 PRR5-ARHGAP8B1AHC4 643 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 NOP2P46087 812 aaKnown RBP8.45□□□□□ -1.06
GNE-205ENST00000539815 YARSP54577 528 aaKnown RBP8.45□□□□□ -1.06
GNE-205ENST00000539815 CCT2P78371 535 aaKnown RBP8.45□□□□□ -1.06
GNE-205ENST00000539815 ARHGAP8P85298 464 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 AMPD2Q01433 879 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 CREMQ03060 361 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 CSTF1Q05048 431 aaKnown RBP8.45□□□□□ -1.06
GNE-205ENST00000539815 AP3B2Q13367 1082 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 ZRSR1Q15695 479 aaKnown RBP8.45□□□□□ -1.06
GNE-205ENST00000539815 XKR9Q5GH70 373 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 TCP11Q8WWU5 503 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 RSPH1Q8WYR4 309 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 GPKOWQ92917 476 aaPredicted RBP eCLIP8.45□□□□□ -1.06
GNE-205ENST00000539815 CEP170P1Q96L14 293 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 INPP4AQ96PE3 977 aaPredicted RBP8.45□□□□□ -1.06
GNE-205ENST00000539815 KIF3AQ9Y496 699 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 HCFC2Q9Y5Z7 792 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 MYH1P12882 1939 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 ERICH4A6NGS2 130 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 CCDC192P0DO97 292 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 NRLP54845 237 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 NKX3-2P78367 333 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 FAM102BQ5T8I3 360 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 C1orf228Q6PIY5 440 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 RINLQ6ZS11 566 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 KCNH7Q9NS40 1196 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 GVINP1Q7Z2Y8 2422 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 CCDC66A2RUB6 948 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 DGKIO75912 1065 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 PBX3P40426 434 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 JAK3P52333 1124 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 DLX2Q07687 328 aaPredicted RBP8.45□□□□□ -1.06
GNE-205ENST00000539815 ELAVL2Q12926 359 aaKnown RBP8.45□□□□□ -1.06
GNE-205ENST00000539815 LPAL2Q16609 132 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 CC2D1AQ6P1N0 951 aaPredicted RBP8.45□□□□□ -1.06
GNE-205ENST00000539815 DCLRE1AQ6PJP8 1040 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 DTWD2Q8NBA8 298 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 NXPE3Q969Y0 559 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 MXRA8Q9BRK3 442 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 PHF20Q9BVI0 1012 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 JADE2Q9NQC1 790 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 DISC1Q9NRI5 854 aa8.45□□□□□ -1.06
GNE-205ENST00000539815 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.45□□□□□ -1.06
GNE-205ENST00000539815 KLF18A0A0U1RQI7 1052 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 ARHGEF15O94989 841 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 GATMP50440 423 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 BLOC1S2Q6QNY1 142 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 MTSS1LQ765P7 747 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 PGBD1Q96JS3 809 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 LRRC2Q9BYS8 371 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 TBC1D17Q9HA65 648 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 UBN1Q9NPG3 1134 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 SUCLA2Q9P2R7 463 aaPredicted RBP8.44□□□□□ -1.06
GNE-205ENST00000539815 NEDD4P46934 1319 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 PLIN4Q96Q06 1357 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms