RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 DENND2CQ68D51 928 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 FBXO11Q86XK2 927 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 COL23A1Q86Y22 540 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-209ENST00000539584 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 XPO6Q96QU8 1125 aaKnown RBP14.36□□□□□ -0.11
UBE3B-209ENST00000539584 RPS6KC1Q96S38 1066 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 EIF2AK1Q9BQI3 630 aaKnown RBP14.36□□□□□ -0.11
UBE3B-209ENST00000539584 OSBPL7Q9BZF2 842 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 DMAC2Q9NW81 257 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 PCYOX1Q9UHG3 505 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 KLRG2A4D1S0 409 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-209ENST00000539584 NPM3O75607 178 aaKnown RBP14.35□□□□□ -0.11
UBE3B-209ENST00000539584 TMOD1P28289 359 aa14.35□□□□□ -0.11
UBE3B-209ENST00000539584 MMP13P45452 471 aa14.35□□□□□ -0.11
UBE3B-209ENST00000539584 CETN1Q12798 172 aa14.35□□□□□ -0.11
UBE3B-209ENST00000539584 CLEC10AQ8IUN9 316 aa14.35□□□□□ -0.11
UBE3B-209ENST00000539584 GLYCTKQ8IVS8 523 aa14.35□□□□□ -0.11
UBE3B-209ENST00000539584 OLIG1Q8TAK6 271 aa14.35□□□□□ -0.11
UBE3B-209ENST00000539584 HSD17B14Q9BPX1 270 aa14.35□□□□□ -0.11
UBE3B-209ENST00000539584 CNOT8Q9UFF9 292 aaKnown RBP14.35□□□□□ -0.11
UBE3B-209ENST00000539584 ATP8A1Q9Y2Q0 1164 aa14.35□□□□□ -0.11
UBE3B-209ENST00000539584 BTAF1O14981 1849 aa14.35□□□□□ -0.11
UBE3B-209ENST00000539584 FAM86B1E9PN63 330 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 MEIS1O00470 390 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 MSH4O15457 936 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 PHF2O75151 1096 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 FAM86B2P0C5J1 330 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 DRD4P21917 467 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 ZNF131P52739 623 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 SNCBQ16143 134 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 C1orf186Q6ZWK4 172 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 FUKQ8N0W3 1084 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 CCDC197Q8NCU1 140 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 CCT6BQ92526 530 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 TEKT1Q969V4 418 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 RUSC1Q9BVN2 902 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 CELF4Q9BZC1 486 aaKnown RBP14.34□□□□□ -0.11
UBE3B-209ENST00000539584 DPH5Q9H2P9 285 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 OSGEPQ9NPF4 335 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 AJAP1Q9UKB5 411 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-209ENST00000539584 PPP1R9AQ9ULJ8 1098 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 CLIC2O15247 247 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 EEF2P13639 858 aaKnown RBP14.34□□□□□ -0.11
UBE3B-209ENST00000539584 SLC8A1P32418 973 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 KLRC3Q07444 240 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 WLSQ5T9L3 541 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 CDC42EP5Q6NZY7 148 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 ZNF720Q7Z2F6 126 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 JAMLQ86YT9 394 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 PARP9Q8IXQ6 854 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 MYCT1Q8N699 235 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 PI4KBQ9UBF8 816 aa14.34□□□□□ -0.11
UBE3B-209ENST00000539584 ZMYM2Q9UBW7 1377 aa14.33□□□□□ -0.11
UBE3B-209ENST00000539584 KIAA0391O15091 583 aaKnown RBP14.33□□□□□ -0.12
UBE3B-209ENST00000539584 MTA2O94776 668 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 SERPINB2P05120 415 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 VCAM1P19320 739 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 ZNF76P36508 570 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 SCTRP47872 440 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 PPP2R5CQ13362 524 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 ALCAMQ13740 583 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 NEDD9Q14511 834 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 CERKLQ49MI3 558 aaPredicted RBP14.33□□□□□ -0.12
UBE3B-209ENST00000539584 PREPLQ4J6C6 727 aaPredicted RBP14.33□□□□□ -0.12
UBE3B-209ENST00000539584 DCAF12L1Q5VU92 463 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 CYB5D1Q6P9G0 228 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 TMEM179Q6ZVK1 233 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 TAOK1Q7L7X3 1001 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 AMIGO3Q86WK7 504 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 PLCD3Q8N3E9 789 aa14.33□□□□□ -0.12
UBE3B-209ENST00000539584 ROPN1BQ9BZX4 212 aaPredicted RBP14.33□□□□□ -0.12
UBE3B-209ENST00000539584 NSRP1Q9H0G5 558 aaKnown RBP14.33□□□□□ -0.12
UBE3B-209ENST00000539584 INTS2Q9H0H0 1204 aaKnown RBP14.33□□□□□ -0.12
UBE3B-209ENST00000539584 ROPN1Q9HAT0 212 aaPredicted RBP14.33□□□□□ -0.12
UBE3B-209ENST00000539584 LRRC37AA6NMS7 1700 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 LTBP1Q14766 1721 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 RSPH10B2B2RC85 870 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 CTNND1O60716 968 aaKnown RBP14.32□□□□□ -0.12
UBE3B-209ENST00000539584 RSPH10BP0C881 870 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 CTNNA2P26232 953 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 PRPF4BQ13523 1007 aaKnown RBP14.32□□□□□ -0.12
UBE3B-209ENST00000539584 QPCTQ16769 361 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 CYFIP1Q7L576 1253 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 ZKSCAN4Q969J2 545 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-209ENST00000539584 ZNF317Q96PQ6 595 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-209ENST00000539584 NACC1Q96RE7 527 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 AGPAT1Q99943 283 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 ZC3H12CQ9C0D7 883 aaKnown RBP14.32□□□□□ -0.12
UBE3B-209ENST00000539584 GPR88Q9GZN0 384 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 WNT8AQ9H1J5 351 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 POLD4Q9HCU8 107 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 TAF1LQ8IZX4 1826 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 LY75O60449 1722 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 CCT8L1PA6NM43 557 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 PMM2O15305 246 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 RGS16O15492 202 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-209ENST00000539584 CAND2O75155 1236 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 RARGP13631 454 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 MYL7Q01449 175 aa14.32□□□□□ -0.12
UBE3B-209ENST00000539584 CYP1B1Q16678 543 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms