RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 HHIPL2Q6UWX4 724 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 C1orf186Q6ZWK4 172 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 CCDC50Q8IVM0 306 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 CCT6BQ92526 530 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 ZKSCAN4Q969J2 545 aaPredicted RBP10.47□□□□□ -0.73
CDH13-204ENST00000539548 CHMP6Q96FZ7 201 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 TRIM31Q9BZY9 425 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 GPR88Q9GZN0 384 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 TUFT1Q9NNX1 390 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 DMAC2Q9NW81 257 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 IGSF9BQ9UPX0 1349 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 LRRC37AA6NMS7 1700 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 EP400Q96L91 3159 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 CCDC169A6NNP5 214 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 SFI1A8K8P3 1242 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 EML1O00423 815 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 KIAA0391O15091 583 aaKnown RBP10.46□□□□□ -0.73
CDH13-204ENST00000539548 UBE4BO95155 1302 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 SERPINB2P05120 415 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 HSPA6P17066 643 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 VCAM1P19320 739 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 NMT1P30419 496 aaKnown RBP10.46□□□□□ -0.73
CDH13-204ENST00000539548 MAP2K2P36507 400 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 PTGIRP43119 386 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 SCTRP47872 440 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 CYP4A11Q02928 519 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 PRPF4BQ13523 1007 aaKnown RBP10.46□□□□□ -0.73
CDH13-204ENST00000539548 PPP2R5AQ15172 486 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 VPS72Q15906 364 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 KIAA1755Q5JYT7 1200 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 FAM196AQ6ZSG2 479 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 CROCCP2Q86T23 111 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 FBXO11Q86XK2 927 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 SP8Q8IXZ3 490 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 FUKQ8N0W3 1084 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 MYCT1Q8N699 235 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 MAGEC3Q8TD91 643 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 ARHGEF26Q96DR7 871 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 NGLY1Q96IV0 654 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 HSD17B14Q9BPX1 270 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 JPH2Q9BR39 696 aaPredicted RBP10.46□□□□□ -0.73
CDH13-204ENST00000539548 INTS2Q9H0H0 1204 aaKnown RBP10.46□□□□□ -0.73
CDH13-204ENST00000539548 ERVK-5Q9HDB9 667 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 RGL1Q9NZL6 768 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 CNOT7Q9UIV1 285 aaKnown RBP10.46□□□□□ -0.73
CDH13-204ENST00000539548 RASAL2Q9UJF2 1139 aa10.46□□□□□ -0.73
CDH13-204ENST00000539548 MIF4GDA9UHW6 222 aaKnown RBP10.46□□□□□ -0.74
CDH13-204ENST00000539548 ADRA2BP18089 450 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 ABCB4P21439 1286 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 POLD1P28340 1107 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 GBP1P32455 592 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 MMP13P45452 471 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 PPARDQ03181 441 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 PDE4CQ08493 712 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 XRCC4Q13426 336 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 SPRED3Q2MJR0 410 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 APOBEC3HQ6NTF7 200 aaKnown RBP10.46□□□□□ -0.74
CDH13-204ENST00000539548 ZDHHC24Q6UX98 284 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 JAMLQ86YT9 394 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 SIAH1Q8IUQ4 282 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 RHOT2Q8IXI1 618 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 PARP9Q8IXQ6 854 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 MDM1Q8TC05 714 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 NEK9Q8TD19 979 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 GLG1Q92896 1179 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 RNF25Q96BH1 459 aaPredicted RBP10.46□□□□□ -0.74
CDH13-204ENST00000539548 ZNF317Q96PQ6 595 aaPredicted RBP10.46□□□□□ -0.74
CDH13-204ENST00000539548 TMEM109Q9BVC6 243 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 DNAJC18Q9H819 358 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 CD248Q9HCU0 757 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 SEL1LQ9UBV2 794 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 APEX2Q9UBZ4 518 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 PNMA2Q9UL42 364 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 COG5Q9UP83 839 aa10.46□□□□□ -0.74
CDH13-204ENST00000539548 CCT8L1PA6NM43 557 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 BACH1O14867 736 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 RIMBP2O15034 1052 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 ASAP2O43150 1006 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 RAD21O60216 631 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 PHF2O75151 1096 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 DNAJC8O75937 253 aaPredicted RBP10.45□□□□□ -0.74
CDH13-204ENST00000539548 SLITRK3O94933 977 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 SHBGP04278 402 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 RFX1P22670 979 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 CHRNA3P32297 505 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 RDXP35241 583 aaKnown RBP10.45□□□□□ -0.74
CDH13-204ENST00000539548 PLTPP55058 493 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 MAPK7Q13164 816 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 SNCBQ16143 134 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 KCTD19Q17RG1 926 aaPredicted RBP10.45□□□□□ -0.74
CDH13-204ENST00000539548 PREPLQ4J6C6 727 aaPredicted RBP10.45□□□□□ -0.74
CDH13-204ENST00000539548 ZC2HC1CQ53FD0 456 aaPredicted RBP10.45□□□□□ -0.74
CDH13-204ENST00000539548 C6orf118Q5T5N4 469 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 DENND2CQ68D51 928 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 C11orf63Q6NUN7 778 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 CYB5D1Q6P9G0 228 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 STXBP4Q6ZWJ1 553 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 ZNF720Q7Z2F6 126 aa10.45□□□□□ -0.74
CDH13-204ENST00000539548 COL23A1Q86Y22 540 aaPredicted RBP10.45□□□□□ -0.74
CDH13-204ENST00000539548 CCDC197Q8NCU1 140 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms