RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CWH43Q9H720 699 aa24.86■■□□□ 1.57
SCARB1-206ENST00000539320 A0A0U1RQF3 1178 aa24.85■■□□□ 1.57
SCARB1-206ENST00000539320 BTBD18B2RXH4 712 aa24.85■■□□□ 1.57
SCARB1-206ENST00000539320 TBX10O75333 385 aa24.85■■□□□ 1.57
SCARB1-206ENST00000539320 FGF18O76093 207 aa24.85■■□□□ 1.57
SCARB1-206ENST00000539320 POLGP54098 1239 aaPredicted RBP24.85■■□□□ 1.57
SCARB1-206ENST00000539320 ADGRD2Q7Z7M1 963 aa24.85■■□□□ 1.57
SCARB1-206ENST00000539320 RGL1Q9NZL6 768 aa24.85■■□□□ 1.57
SCARB1-206ENST00000539320 ATF7P17544 494 aaPredicted RBP24.84■■□□□ 1.57
SCARB1-206ENST00000539320 YWHABP31946 246 aaKnown RBP24.84■■□□□ 1.57
SCARB1-206ENST00000539320 RFC5P40937 340 aa24.84■■□□□ 1.57
SCARB1-206ENST00000539320 CYP4A11Q02928 519 aa24.84■■□□□ 1.57
SCARB1-206ENST00000539320 DLX2Q07687 328 aaPredicted RBP24.84■■□□□ 1.57
SCARB1-206ENST00000539320 CALCRLQ16602 461 aa24.84■■□□□ 1.57
SCARB1-206ENST00000539320 CLLU1OSQ5K130 101 aa24.84■■□□□ 1.57
SCARB1-206ENST00000539320 ZNF598Q86UK7 904 aaKnown RBP24.84■■□□□ 1.57
SCARB1-206ENST00000539320 EXOC8Q8IYI6 725 aa24.84■■□□□ 1.57
SCARB1-206ENST00000539320 DYDC2Q96IM9 177 aa24.84■■□□□ 1.57
SCARB1-206ENST00000539320 C1QTNF1Q9BXJ1 281 aa24.84■■□□□ 1.57
SCARB1-206ENST00000539320 DHX33Q9H6R0 707 aaKnown RBP24.84■■□□□ 1.57
SCARB1-206ENST00000539320 ZSWIM4Q9H7M6 989 aa24.84■■□□□ 1.57
SCARB1-206ENST00000539320 CD320Q9NPF0 282 aa24.84■■□□□ 1.57
SCARB1-206ENST00000539320 TLR9Q9NR96 1032 aa24.84■■□□□ 1.57
SCARB1-206ENST00000539320 CHST12Q9NRB3 414 aa24.84■■□□□ 1.57
SCARB1-206ENST00000539320 COL4A3BPQ9Y5P4 624 aa24.84■■□□□ 1.57
SCARB1-206ENST00000539320 LINC01565O15544 149 aa24.83■■□□□ 1.57
SCARB1-206ENST00000539320 NEMFO60524 1076 aa24.83■■□□□ 1.57
SCARB1-206ENST00000539320 NDUFV1P49821 464 aa24.83■■□□□ 1.57
SCARB1-206ENST00000539320 CLUL1Q15846 466 aa24.83■■□□□ 1.57
SCARB1-206ENST00000539320 KSR1Q8IVT5 923 aa24.83■■□□□ 1.57
SCARB1-206ENST00000539320 GJD3Q8N144 294 aa24.83■■□□□ 1.57
SCARB1-206ENST00000539320 ZNF579Q8NAF0 562 aaKnown RBP24.83■■□□□ 1.57
SCARB1-206ENST00000539320 LIMCH1Q9UPQ0 1083 aa24.83■■□□□ 1.57
SCARB1-206ENST00000539320 PIN4Q9Y237 131 aaKnown RBP24.83■■□□□ 1.57
SCARB1-206ENST00000539320 PCDHGC5Q9Y5F6 944 aa24.83■■□□□ 1.57
SCARB1-206ENST00000539320 ARID2Q68CP9 1835 aa24.82■■□□□ 1.56
SCARB1-206ENST00000539320 GAS2O43903 313 aaKnown RBP24.82■■□□□ 1.56
SCARB1-206ENST00000539320 EOMESO95936 686 aa24.82■■□□□ 1.56
SCARB1-206ENST00000539320 SSTR3P32745 418 aaPredicted RBP24.82■■□□□ 1.56
SCARB1-206ENST00000539320 CTTNQ14247 550 aaKnown RBP24.82■■□□□ 1.56
SCARB1-206ENST00000539320 EMC2Q15006 297 aa24.82■■□□□ 1.56
SCARB1-206ENST00000539320 TWF2Q6IBS0 349 aaKnown RBP24.82■■□□□ 1.56
SCARB1-206ENST00000539320 LRRC55Q6ZSA7 311 aa24.82■■□□□ 1.56
SCARB1-206ENST00000539320 OTUD6AQ7L8S5 288 aa24.82■■□□□ 1.56
SCARB1-206ENST00000539320 CATSPER4Q7RTX7 472 aa24.82■■□□□ 1.56
SCARB1-206ENST00000539320 CCDC83Q8IWF9 413 aa24.82■■□□□ 1.56
SCARB1-206ENST00000539320 EFHBQ8N7U6 833 aa24.82■■□□□ 1.56
SCARB1-206ENST00000539320 PSPC1Q8WXF1 523 aaKnown RBP24.82■■□□□ 1.56
SCARB1-206ENST00000539320 ZNF558Q96NG5 402 aa24.82■■□□□ 1.56
SCARB1-206ENST00000539320 BMP2KQ9NSY1 1161 aaPredicted RBP24.82■■□□□ 1.56
SCARB1-206ENST00000539320 WNT7AO00755 349 aa24.81■■□□□ 1.56
SCARB1-206ENST00000539320 PPM1AP35813 382 aa24.81■■□□□ 1.56
SCARB1-206ENST00000539320 PHKA2P46019 1235 aa24.81■■□□□ 1.56
SCARB1-206ENST00000539320 NRIP1P48552 1158 aa24.81■■□□□ 1.56
SCARB1-206ENST00000539320 ADAM15Q13444 863 aa24.81■■□□□ 1.56
SCARB1-206ENST00000539320 SMAD4Q13485 552 aaKnown RBP24.81■■□□□ 1.56
SCARB1-206ENST00000539320 XKR9Q5GH70 373 aa24.81■■□□□ 1.56
SCARB1-206ENST00000539320 HELQQ8TDG4 1101 aa24.81■■□□□ 1.56
SCARB1-206ENST00000539320 MICAL1Q8TDZ2 1067 aa24.81■■□□□ 1.56
SCARB1-206ENST00000539320 TMEM143Q96AN5 459 aa24.81■■□□□ 1.56
SCARB1-206ENST00000539320 EIF2AK1Q9BQI3 630 aaKnown RBP24.81■■□□□ 1.56
SCARB1-206ENST00000539320 TRAIPQ9BWF2 469 aa24.81■■□□□ 1.56
SCARB1-206ENST00000539320 MRPL9Q9BYD2 267 aaKnown RBP24.81■■□□□ 1.56
SCARB1-206ENST00000539320 EPHX3Q9H6B9 360 aa24.81■■□□□ 1.56
SCARB1-206ENST00000539320 CD207Q9UJ71 328 aa24.81■■□□□ 1.56
SCARB1-206ENST00000539320 LZTS1Q9Y250 596 aa24.81■■□□□ 1.56
SCARB1-206ENST00000539320 PLCB3Q01970 1234 aa24.8■■□□□ 1.56
SCARB1-206ENST00000539320 SAFBQ15424 915 aaKnown RBP eCLIP24.8■■□□□ 1.56
SCARB1-206ENST00000539320 KCNT2Q6UVM3 1135 aa24.8■■□□□ 1.56
SCARB1-206ENST00000539320 TPH2Q8IWU9 490 aa24.8■■□□□ 1.56
SCARB1-206ENST00000539320 TCP11Q8WWU5 503 aa24.8■■□□□ 1.56
SCARB1-206ENST00000539320 MRPS27Q92552 414 aaKnown RBP24.8■■□□□ 1.56
SCARB1-206ENST00000539320 KHSRPQ92945 711 aaKnown RBP eCLIP24.8■■□□□ 1.56
SCARB1-206ENST00000539320 IFT122Q9HBG6 1241 aa24.8■■□□□ 1.56
SCARB1-206ENST00000539320 PRKAG3Q9UGI9 489 aa24.8■■□□□ 1.56
SCARB1-206ENST00000539320 PCDHA12Q9UN75 941 aa24.8■■□□□ 1.56
SCARB1-206ENST00000539320 FSCN2O14926 492 aa24.79■■□□□ 1.56
SCARB1-206ENST00000539320 MBTPS2O43462 519 aa24.79■■□□□ 1.56
SCARB1-206ENST00000539320 SKIP12755 728 aa24.79■■□□□ 1.56
SCARB1-206ENST00000539320 PBX3P40426 434 aa24.79■■□□□ 1.56
SCARB1-206ENST00000539320 RAB27AP51159 221 aa24.79■■□□□ 1.56
SCARB1-206ENST00000539320 GUCY1B3Q02153 619 aa24.79■■□□□ 1.56
SCARB1-206ENST00000539320 ZP2Q05996 745 aa24.79■■□□□ 1.56
SCARB1-206ENST00000539320 PDE12Q6L8Q7 609 aaKnown RBP24.79■■□□□ 1.56
SCARB1-206ENST00000539320 RBM23Q86U06 439 aaKnown RBP24.79■■□□□ 1.56
SCARB1-206ENST00000539320 RSPH1Q8WYR4 309 aa24.79■■□□□ 1.56
SCARB1-206ENST00000539320 LLPHQ9BRT6 129 aaKnown RBP24.79■■□□□ 1.56
SCARB1-206ENST00000539320 TLE6Q9H808 572 aa24.79■■□□□ 1.56
SCARB1-206ENST00000539320 TTC12Q9H892 705 aaPredicted RBP24.79■■□□□ 1.56
SCARB1-206ENST00000539320 AGPAT5Q9NUQ2 364 aa24.79■■□□□ 1.56
SCARB1-206ENST00000539320 PUF60Q9UHX1 559 aaKnown RBP24.79■■□□□ 1.56
SCARB1-206ENST00000539320 SLITRK3O94933 977 aa24.78■■□□□ 1.56
SCARB1-206ENST00000539320 LYPLA2O95372 231 aa24.78■■□□□ 1.56
SCARB1-206ENST00000539320 COL9A1P20849 921 aa24.78■■□□□ 1.56
SCARB1-206ENST00000539320 ERVFC1P60507 584 aa24.78■■□□□ 1.56
SCARB1-206ENST00000539320 LAMTOR4Q0VGL1 99 aa24.78■■□□□ 1.56
SCARB1-206ENST00000539320 SMAD2Q15796 467 aaKnown RBP24.78■■□□□ 1.56
SCARB1-206ENST00000539320 SRGAP1Q7Z6B7 1085 aa24.78■■□□□ 1.56
SCARB1-206ENST00000539320 PRPF31Q8WWY3 499 aaKnown RBP24.78■■□□□ 1.56
SCARB1-206ENST00000539320 C8orf76Q96K31 380 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms