RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 TELO2Q9Y4R8 837 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 PCDHA5Q9Y5H7 936 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 CCDC169A6NNP5 214 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 ZBTB42B2RXF5 422 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 COL6A1P12109 1028 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 TPM4P67936 248 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
CLPB-210ENST00000539148 ADAM17P78536 824 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 MDM2Q00987 491 aaPredicted RBP11.28□□□□□ -0.6
CLPB-210ENST00000539148 TYRO3Q06418 890 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 RAD51AP2Q09MP3 1159 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 PNOCQ13519 176 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 CUL4BQ13620 913 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 ARSHQ5FYA8 562 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 FAM26FQ5R3K3 315 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 ZNF658Q5TYW1 1059 aaPredicted RBP11.28□□□□□ -0.6
CLPB-210ENST00000539148 MAEAQ7L5Y9 396 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 ANKRD33Q7Z3H0 272 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 SRGAP1Q7Z6B7 1085 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 RHPN2Q8IUC4 686 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 MLKLQ8NB16 471 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 PRPF31Q8WWY3 499 aaKnown RBP11.28□□□□□ -0.6
CLPB-210ENST00000539148 NLRP7Q8WX94 980 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 STAMQ92783 540 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 DNAJC19Q96DA6 116 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 PAWRQ96IZ0 340 aaKnown RBP11.28□□□□□ -0.6
CLPB-210ENST00000539148 NFKBIZQ9BYH8 718 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 BLZF1Q9H2G9 400 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 TMEM206Q9H813 350 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 SQORQ9Y6N5 450 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 UBE4BO95155 1302 aa11.28□□□□□ -0.6
CLPB-210ENST00000539148 A0A087WWV3 80 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 FRMD3A2A2Y4 597 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 TMEM150BA6NC51 233 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 LRRIQ4A6NIV6 560 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 K7ERI5 159 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 PITPNM1O00562 1244 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 PSMA7O14818 248 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 EIF3DO15371 548 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLPB-210ENST00000539148 TREHO43280 583 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 SFPQP23246 707 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLPB-210ENST00000539148 MSNP26038 577 aaKnown RBP11.27□□□□□ -0.61
CLPB-210ENST00000539148 ARL2P36404 184 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 CDK7P50613 346 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 PEX3P56589 373 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 SOX10P56693 466 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 SNRPFP62306 86 aaKnown RBP11.27□□□□□ -0.61
CLPB-210ENST00000539148 LAMTOR4Q0VGL1 99 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 COASYQ13057 564 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 SNX17Q15036 470 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 MARCH8Q5T0T0 291 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 GDF6Q6KF10 455 aaPredicted RBP11.27□□□□□ -0.61
CLPB-210ENST00000539148 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.27□□□□□ -0.61
CLPB-210ENST00000539148 ZSCAN30Q86W11 494 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 SPATA20Q8TB22 786 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 GOLGA5Q8TBA6 731 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 TRAPPC12Q8WVT3 735 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 TMEM143Q96AN5 459 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 CEP89Q96ST8 783 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 BPIFA3Q9BQP9 254 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 SH2D3AQ9BRG2 576 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 FAM49AQ9H0Q0 323 aaPredicted RBP11.27□□□□□ -0.61
CLPB-210ENST00000539148 ST6GALNAC4Q9H4F1 302 aa11.27□□□□□ -0.61
CLPB-210ENST00000539148 RNF216Q9NWF9 866 aaPredicted RBP11.27□□□□□ -0.61
CLPB-210ENST00000539148 CGNQ9P2M7 1197 aaKnown RBP11.27□□□□□ -0.61
CLPB-210ENST00000539148 BICDL2A1A5D9 508 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 ESPNB1AK53 854 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 GOLGA6L19H0YKK7 550 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 K7ENM7 598 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 PQBP1O60828 265 aaKnown RBP11.26□□□□□ -0.61
CLPB-210ENST00000539148 ERLIN2O94905 339 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 GCNT3O95395 438 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 CLCN3P51790 818 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 CRYBB1P53674 252 aaPredicted RBP11.26□□□□□ -0.61
CLPB-210ENST00000539148 MRPS6P82932 125 aaKnown RBP11.26□□□□□ -0.61
CLPB-210ENST00000539148 RBL2Q08999 1139 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 MAPK6Q16659 721 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 KMT5BQ4FZB7 885 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 HS2ST1Q7LGA3 356 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 HAUS6Q7Z4H7 955 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 FAM126BQ8IXS8 530 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 GRAMD1CQ8IYS0 662 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 KIAA0319LQ8IZA0 1049 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 SYCP3Q8IZU3 236 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 LRRC71Q8N4P6 559 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 RNF149Q8NC42 400 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 DNAJB3Q8WWF6 145 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 KCNN1Q92952 543 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 PRIMPOLQ96LW4 560 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 NLRP4Q96MN2 994 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 CELF4Q9BZC1 486 aaKnown RBP11.26□□□□□ -0.61
CLPB-210ENST00000539148 TMEM134Q9H6X4 195 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 XPNPEP1Q9NQW7 623 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 PRMT7Q9NVM4 692 aaPredicted RBP11.26□□□□□ -0.61
CLPB-210ENST00000539148 TRPV2Q9Y5S1 764 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 GRIN2DO15399 1336 aa11.26□□□□□ -0.61
CLPB-210ENST00000539148 HTTP42858 3142 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 GPR182O15218 404 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 B4GALT4O60513 344 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 FGFR1OPO95684 399 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms