RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ASH2LQ9UBL3 628 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 ZNF180Q9UJW8 692 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 FAM50BQ9Y247 325 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 COA3Q9Y2R0 106 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 COMMD10Q9Y6G5 202 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CLCA1A8K7I4 914 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 H3BML4 177 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 IFRD1O00458 451 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 KRIT1O00522 736 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 N4BP3O15049 544 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 GAS2O43903 313 aaKnown RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 C4BPAP04003 597 aaKnown RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 NTRK1P04629 796 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CYP2C9P11712 490 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 GRK2P25098 689 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 GRK3P35626 688 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 TRAPPC10P48553 1259 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 IRX6P78412 446 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 POU5F1BQ06416 359 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 DOC2BQ14184 412 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 DDB1Q16531 1140 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 AOC3Q16853 763 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 KCNK18Q7Z418 384 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 PLEKHH3Q7Z736 793 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CPA6Q8N4T0 437 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 FAM26EQ8N5C1 309 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 PPM1NQ8N819 430 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 PPHLN1Q8NEY8 458 aaKnown RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 ZNF526Q8TF50 670 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 UBE2Q2Q8WVN8 375 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 FDXACB1Q9BRP7 624 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 LSM14BQ9BX40 385 aaKnown RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 MANSC1Q9H8J5 431 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 TAGLN3Q9UI15 199 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 MAGEL2Q9UJ55 1249 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 ZDHHC8Q9ULC8 765 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 WASHC2AQ641Q2 1341 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 GOLGA6L10A0A0M3HER8 536 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 GOLGA6L22H0YM25 854 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 H7C1D1 291 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 NRP1O14786 923 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 CCP110O43303 1012 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 DTNBO60941 627 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 TUSC2O75896 110 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SEC24DO94855 1032 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 ZGLP1P0C6A0 271 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 LPOP22079 712 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 MVKQ03426 396 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 OS9Q13438 667 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 MYBPC3Q14896 1274 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 ACAP1Q15027 740 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 ZNF174Q15697 407 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 C3orf36Q3SXR2 165 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 ATP13A4Q4VNC1 1196 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 HSP90AB4PQ58FF6 505 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 ERAP2Q6P179 960 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 DRICH1Q6PGQ1 229 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SUGP1Q8IWZ8 645 aaKnown RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 BCL6BQ8N143 479 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 USP38Q8NB14 1042 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 PPM1EQ8WY54 764 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 TEKT5Q96M29 485 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 MOGAT1Q96PD6 335 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 PDLIM7Q9NR12 457 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SCOCQ9UIL1 159 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 PCDHGB6Q9Y5F9 930 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 MUC5BQ9HC84 5762 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 NPHP3-ACAD11A0A0J9YXS1 232 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SGSM2O43147 1006 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 KCNQ3O43525 872 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 CSPG5O95196 566 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 FGAP02671 866 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 FBLN1P23142 703 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 CRHR1P34998 444 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 TM4SF4P48230 202 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 CD97P48960 835 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 RGS3P49796 1198 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SLC16A1P53985 500 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 IL2P60568 153 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 IRF9Q00978 393 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 RSPO4Q2I0M5 234 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 CT83Q5H943 113 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 FYB2Q5VWT5 728 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 OTUD7BQ6GQQ9 843 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 TANGO2Q6ICL3 276 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 LRSAM1Q6UWE0 723 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 BTNL9Q6UXG8 535 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 ARHGAP36Q6ZRI8 547 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 CEP68Q76N32 757 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 RTN4RL1Q86UN2 441 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 STK32CQ86UX6 486 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 EXOC8Q8IYI6 725 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 FBXO18Q8NFZ0 1043 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 RPGRQ92834 1020 aaKnown RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 TP53INP1Q96A56 240 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 RPS6KC1Q96S38 1066 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 STRBPQ96SI9 672 aaKnown RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 ARPC5LQ9BPX5 153 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 POLR3GLQ9BT43 218 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SARGQ9BW04 601 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms