RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	CATSPER3	Q86XQ3	398 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	SCLT1	Q96NL6	688 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	ATP6V0A4	Q9HBG4	840 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	IFT122	Q9HBG6	1241 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	LRFN2	Q9ULH4	789 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	BRWD1	Q9NSI6	2320 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828		A0A087WZ62	844 aa		13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	ATP2B1	P20020	1258 aa		13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	TEC	P42680	631 aa		13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	RAB27A	P51159	221 aa		13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	RHPN2	Q8IUC4	686 aa		13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	MCPH1	Q8NEM0	835 aa		13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	SNX21	Q969T3	373 aa		13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	MRPL38	Q96DV4	380 aa	Known RBP	13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	C17orf80	Q9BSJ5	609 aa		13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	COG5	Q9UP83	839 aa		13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	PCDHB6	Q9Y5E3	794 aa		13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	EYS	Q5T1H1	3165 aa		13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.71	□□□□□ -0.21
CLTCL1-205	ENST00000538828	AXL	P30530	894 aa		13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	ARL2	P36404	184 aa		13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PTEN	P60484	403 aa		13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	ATP2C1	P98194	919 aa	Predicted RBP	13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	LAMTOR4	Q0VGL1	99 aa		13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	TFDP1	Q14186	410 aa		13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	ECHDC2	Q86YB7	292 aa		13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	ZNF579	Q8NAF0	562 aa	Known RBP	13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PRPF31	Q8WWY3	499 aa	Known RBP	13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	CCDC51	Q96ER9	411 aa		13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	CCDC43	Q96MW1	224 aa	Known RBP	13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	SH2D3A	Q9BRG2	576 aa		13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	TMEM117	Q9H0C3	514 aa		13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	XPNPEP1	Q9NQW7	623 aa		13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	GTF3C3	Q9Y5Q9	886 aa		13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	TTC28	Q96AY4	2481 aa		13.7	□□□□□ -0.22
CLTCL1-205	ENST00000538828	UNC80	Q8N2C7	3258 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	ZBTB39	O15060	712 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	NCK2	O43639	380 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	MED24	O75448	989 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PHKA2	P46019	1235 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	UBE3A	Q05086	875 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	GPM6B	Q13491	265 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	AAK1	Q2M2I8	961 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	TIGD5	Q53EQ6	642 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	MCTP1	Q6DN14	999 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	DTHD1	Q6ZMT9	781 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	ZNF598	Q86UK7	904 aa	Known RBP	13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	CERS4	Q9HA82	394 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	AAAS	Q9NRG9	546 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	AGPAT5	Q9NUQ2	364 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	THEG	Q9P2T0	379 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	LRWD1	Q9UFC0	647 aa		13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828	COL4A4	P53420	1690 aa	Predicted RBP	13.69	□□□□□ -0.22
CLTCL1-205	ENST00000538828		K7ELQ4	463 aa	Predicted RBP	13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	RFXAP	O00287	272 aa		13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	CYP11B2	P19099	503 aa		13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	NCBP1	Q09161	790 aa	Known RBP	13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	HYI	Q5T013	277 aa		13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	CATSPER4	Q7RTX7	472 aa		13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	SPRED2	Q7Z698	418 aa		13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	RNF149	Q8NC42	400 aa		13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	CNNM3	Q8NE01	707 aa		13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PIGO	Q8TEQ8	1089 aa		13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	SYMPK	Q92797	1274 aa	Known RBP	13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	TMEM143	Q96AN5	459 aa		13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	AK8	Q96MA6	479 aa		13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	NLRP4	Q96MN2	994 aa		13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PPP1R16B	Q96T49	567 aa		13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	MRPL9	Q9BYD2	267 aa	Known RBP	13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	MYO7A	Q13402	2215 aa		13.68	□□□□□ -0.22
CLTCL1-205	ENST00000538828	CTNNB1	P35222	781 aa		13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	COL19A1	Q14993	1142 aa		13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PPP2R5A	Q15172	486 aa		13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	FAM187B	Q17R55	369 aa		13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	KRT79	Q5XKE5	535 aa		13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PDE12	Q6L8Q7	609 aa	Known RBP	13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	MRPL10	Q7Z7H8	261 aa	Known RBP	13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	GDPD5	Q8WTR4	605 aa		13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PGBD4	Q96DM1	585 aa		13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PRIMPOL	Q96LW4	560 aa		13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	NT5C3A	Q9H0P0	336 aa		13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	KCNG1	Q9UIX4	513 aa		13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	LZTS1	Q9Y250	596 aa		13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PCDHB12	Q9Y5F1	795 aa		13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	MRPL42	Q9Y6G3	142 aa	Known RBP	13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	ZMYM2	Q9UBW7	1377 aa		13.67	□□□□□ -0.22
CLTCL1-205	ENST00000538828	CNTNAP2	Q9UHC6	1331 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	FSD2	A1L4K1	749 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	ARHGEF35	A5YM69	484 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	ATF7	P17544	494 aa	Predicted RBP	13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	LAG3	P18627	525 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	GLRA2	P23416	452 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	HOXA11	P31270	313 aa	Predicted RBP	13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	CCT6A	P40227	531 aa	Known RBP	13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	MRPS5	P82675	430 aa	Known RBP	13.66	□□□□□ -0.22

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