RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 LMBR1Q8WVP7 490 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 LXNQ9BS40 222 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 TMBIM4Q9HC24 238 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 FRMD4BQ9Y2L6 1034 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 STK24Q9Y6E0 443 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 MYH11P35749 1972 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 FRMPD4Q14CM0 1322 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 A0A0A6YYK5 440 aaPredicted RBP12.99□□□□□ -0.33
CPNE8-203ENST00000538596 EXOC3O60645 756 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 HDLBPQ00341 1268 aaKnown RBP12.99□□□□□ -0.33
CPNE8-203ENST00000538596 ZNF844Q08AG5 666 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 CUL1Q13616 776 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 SLC15A2Q16348 729 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 HS2ST1Q7LGA3 356 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 TADA2BQ86TJ2 420 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 EFCAB13Q8IY85 973 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 SYCP3Q8IZU3 236 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 DAW1Q8N136 415 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 CALR3Q96L12 384 aaKnown RBP12.99□□□□□ -0.33
CPNE8-203ENST00000538596 SYT11Q9BT88 431 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 GLIS2Q9BZE0 524 aaPredicted RBP12.99□□□□□ -0.33
CPNE8-203ENST00000538596 ERVK-5Q9HDB9 667 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 TMOD4Q9NZQ9 345 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 YDJCA8MPS7 323 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 DCDC2CA8MYV0 355 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 DDX3YO15523 660 aaKnown RBP12.98□□□□□ -0.33
CPNE8-203ENST00000538596 HIP1RO75146 1068 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 MYL7Q01449 175 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 TTC31Q49AM3 519 aaPredicted RBP12.98□□□□□ -0.33
CPNE8-203ENST00000538596 PPM1EQ8WY54 764 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 DMAC2Q9NW81 257 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 APEX2Q9UBZ4 518 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 BHMG1C9JSJ3 638 aaPredicted RBP12.98□□□□□ -0.33
CPNE8-203ENST00000538596 MYO1FO00160 1098 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 ZNF131P52739 623 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 ZNF746Q6NUN9 644 aaPredicted RBP12.98□□□□□ -0.33
CPNE8-203ENST00000538596 MIGA2Q7L4E1 593 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 CTNNBL1Q8WYA6 563 aaPredicted RBP12.98□□□□□ -0.33
CPNE8-203ENST00000538596 RFFLQ8WZ73 363 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 ALG3Q92685 438 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 GLG1Q92896 1179 aa12.98□□□□□ -0.33
CPNE8-203ENST00000538596 RBBP6Q7Z6E9 1792 aaKnown RBP12.97□□□□□ -0.33
CPNE8-203ENST00000538596 ATRNL1Q5VV63 1379 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 TMEM150BA6NC51 233 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 PPP1R37O75864 691 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 MYZAPP0CAP1 466 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 LMNB1P20700 586 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 TNFAIP3P21580 790 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 TMOD1P28289 359 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 MDH1P40925 334 aaKnown RBP12.97□□□□□ -0.33
CPNE8-203ENST00000538596 EN1Q05925 392 aaPredicted RBP12.97□□□□□ -0.33
CPNE8-203ENST00000538596 PPATQ06203 517 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 MAPK7Q13164 816 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 PTGISQ16647 500 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 NACC1Q96RE7 527 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 EPN3Q9H201 632 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 ACP6Q9NPH0 428 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 PPANQ9NQ55 473 aaKnown RBP12.97□□□□□ -0.33
CPNE8-203ENST00000538596 INTUQ9ULD6 942 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 ZBTB21Q9ULJ3 1066 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 SCAF8Q9UPN6 1271 aaKnown RBP12.97□□□□□ -0.33
CPNE8-203ENST00000538596 A0A087WUV0 522 aaPredicted RBP12.97□□□□□ -0.33
CPNE8-203ENST00000538596 HMGB1P1B2RPK0 211 aaPredicted RBP12.97□□□□□ -0.33
CPNE8-203ENST00000538596 CCDC188H7C350 402 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 IPO5O00410 1097 aaKnown RBP12.97□□□□□ -0.33
CPNE8-203ENST00000538596 BACH1O14867 736 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 ENTPD3O75355 529 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 VIL1P09327 827 aaKnown RBP12.97□□□□□ -0.33
CPNE8-203ENST00000538596 TMEM253P0C7T8 217 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 ANXA13P27216 316 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 POU5F1Q01860 360 aaKnown RBP12.97□□□□□ -0.33
CPNE8-203ENST00000538596 DHX9Q08211 1270 aaKnown RBP12.97□□□□□ -0.33
CPNE8-203ENST00000538596 BFSP1Q12934 665 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 CC2D2BQ6DHV5 1058 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 ARHGEF19Q8IW93 802 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 LMO3Q8TAP4 145 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 KAT2BQ92831 832 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 KAT5Q92993 513 aa12.97□□□□□ -0.33
CPNE8-203ENST00000538596 UBE2TQ9NPD8 197 aaPredicted RBP12.97□□□□□ -0.33
CPNE8-203ENST00000538596 ARHGEF35A5YM69 484 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 GOLGA6L10A6NI86 522 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 TMEM110-MUSTN1A8MSY1 372 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 K7ENM7 598 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 PLSCR1O15162 318 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 NPM3O75607 178 aaKnown RBP12.96□□□□□ -0.33
CPNE8-203ENST00000538596 MARCKSL1P49006 195 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 NPEPPSP55786 919 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 GRIPAP1Q4V328 841 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 TMC3Q7Z5M5 1100 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 ELMO3Q96BJ8 720 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 CBWD1Q9BRT8 395 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 MKNK1Q9BUB5 465 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 ARHGEF10LQ9HCE6 1279 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 TMX2Q9Y320 296 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 NCANO14594 1321 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 EMSYQ7Z589 1322 aa12.96□□□□□ -0.33
CPNE8-203ENST00000538596 ZNF646O15015 1829 aaPredicted RBP12.96□□□□□ -0.33
CPNE8-203ENST00000538596 ITGB5P18084 799 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms