RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 VAT1LQ9HCJ6 419 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 DBR1Q9UK59 544 aaKnown RBP20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 AJAP1Q9UKB5 411 aaPredicted RBP20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 PNMA3Q9UL41 463 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 MINPP1Q9UNW1 487 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 HSPA6P17066 643 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 RPL21P46778 160 aaKnown RBP20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 RBBP5Q15291 538 aaKnown RBP20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 CCDC38Q502W7 563 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 LNX1Q8TBB1 728 aaPredicted RBP20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 TRIM7Q9C029 511 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 TRAF3IP3Q9Y228 551 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 FESP07332 822 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 PLA2G4BP0C869 781 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 LMNB1P20700 586 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 ADCY7P51828 1080 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 LRRC14Q15048 493 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 DIXDC1Q155Q3 683 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 MEX3CQ5U5Q3 659 aaKnown RBP20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 GPBP1Q86WP2 473 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 CTNNBL1Q8WYA6 563 aaPredicted RBP20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 C18orf8Q96DM3 657 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 PRKAG3Q9UGI9 489 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 PCYOX1Q9UHG3 505 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 NIP7Q9Y221 180 aaKnown RBP eCLIP20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 LOC102724428A0A0B4J2F2 783 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 E9PMD0 336 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 VCAM1P19320 739 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 SIK1P57059 783 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 RWDD2BP57060 319 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 CACNB1Q02641 598 aaPredicted RBP20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 ZNF211Q13398 564 aaPredicted RBP20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 SLC44A5Q8NCS7 719 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 ZBTB10Q96DT7 871 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 OSBPL1AQ9BXW6 950 aa20.06■□□□□ 0.8
SFSWAP-207ENST00000538548 DOT1LQ8TEK3 1739 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 SYNGAP1Q96PV0 1343 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 AHCYL1O43865 530 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 RASA1P20936 1047 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 DCAF17Q5H9S7 520 aaPredicted RBP20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 OLIG1Q8TAK6 271 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 RAB3IPQ96QF0 476 aaPredicted RBP20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 FAM167BQ9BTA0 163 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 GCNT4Q9P109 453 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 NPHP3-ACAD11A0A0J9YXS1 232 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 TMEM120BA0PK00 339 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 HIP1RO75146 1068 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 SNUPNO95149 360 aaKnown RBP20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 CYP11B2P19099 503 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 PDE6BP35913 854 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 STAT1P42224 750 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 MGARPQ8TDB4 240 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 ALG3Q92685 438 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 HAS1Q92839 578 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 PCDHA3Q9Y5H8 950 aa20.05■□□□□ 0.8
SFSWAP-207ENST00000538548 IGSF9BQ9UPX0 1349 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 CAMTA2O94983 1202 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 KLRK1P26718 216 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 CRKLP46109 303 aaKnown RBP20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 MKRN3Q13064 507 aaKnown RBP20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 DZIP1Q86YF9 867 aaKnown RBP20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 GLYCTKQ8IVS8 523 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 TAOK3Q9H2K8 898 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 ARHGEF10LQ9HCE6 1279 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 ETAA1Q9NY74 926 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 TRIM33Q9UPN9 1127 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 KIAA1024Q9UPX6 916 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 PITPNM2Q9BZ72 1349 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 UNC5CO95185 931 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 PECAM1P16284 738 aaPredicted RBP20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 ATP4AP20648 1035 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 CKAP2Q8WWK9 683 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 ARHGEF2Q92974 986 aaKnown RBP20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 METTL14Q9HCE5 456 aaKnown RBP20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 DDX25Q9UHL0 483 aaKnown RBP20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 LRRC42Q9Y546 428 aa20.04■□□□□ 0.8
SFSWAP-207ENST00000538548 NRAPQ86VF7 1730 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 GTPBP10A4D1E9 387 aaKnown RBP20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 E7ENQ6 273 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 CCDC15Q0P6D6 951 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 KNOP1Q1ED39 458 aaKnown RBP20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 TCERG1LQ5VWI1 586 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 RNF43Q68DV7 783 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 PRELID2Q8N945 189 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 MXD3Q9BW11 206 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 RIOX1Q9H6W3 641 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 KLHL14Q9P2G3 628 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 PCDHA12Q9UN75 941 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 THRAP3Q9Y2W1 955 aaKnown RBP20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 MARCH6O60337 910 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 KRT18P05783 430 aaKnown RBP20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 NEFHP12036 1026 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 ABCB4P21439 1286 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 ATP5DP30049 168 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 HIBADHP31937 336 aaKnown RBP20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 TNNI2P48788 182 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 GJB7Q6PEY0 223 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 VSTM1Q6UX27 236 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 CERKQ8TCT0 537 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms