RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 FAM102BQ5T8I3 360 aa23.95■■□□□ 1.42
CCDC78-215ENST00000538176 ECHDC2Q86YB7 292 aa23.95■■□□□ 1.42
CCDC78-215ENST00000538176 ERMNQ8TAM6 284 aa23.95■■□□□ 1.42
CCDC78-215ENST00000538176 CCDC43Q96MW1 224 aaKnown RBP23.95■■□□□ 1.42
CCDC78-215ENST00000538176 MTRQ99707 1265 aa23.95■■□□□ 1.42
CCDC78-215ENST00000538176 GRM6O15303 877 aa23.94■■□□□ 1.42
CCDC78-215ENST00000538176 U2AF2P26368 475 aaKnown RBP eCLIP23.94■■□□□ 1.42
CCDC78-215ENST00000538176 POU5F1BQ06416 359 aa23.94■■□□□ 1.42
CCDC78-215ENST00000538176 PUS10Q3MIT2 529 aaKnown RBP23.94■■□□□ 1.42
CCDC78-215ENST00000538176 ADAMTS19Q8TE59 1207 aa23.94■■□□□ 1.42
CCDC78-215ENST00000538176 PRPF31Q8WWY3 499 aaKnown RBP23.94■■□□□ 1.42
CCDC78-215ENST00000538176 ZNF668Q96K58 619 aaPredicted RBP23.94■■□□□ 1.42
CCDC78-215ENST00000538176 NLRP4Q96MN2 994 aa23.94■■□□□ 1.42
CCDC78-215ENST00000538176 UBE2ZQ9H832 354 aaPredicted RBP23.94■■□□□ 1.42
CCDC78-215ENST00000538176 TUFT1Q9NNX1 390 aa23.94■■□□□ 1.42
CCDC78-215ENST00000538176 STK24Q9Y6E0 443 aa23.94■■□□□ 1.42
CCDC78-215ENST00000538176 OR52Z1P0C646 297 aa23.93■■□□□ 1.42
CCDC78-215ENST00000538176 LAG3P18627 525 aa23.93■■□□□ 1.42
CCDC78-215ENST00000538176 IBSPP21815 317 aaPredicted RBP23.93■■□□□ 1.42
CCDC78-215ENST00000538176 MUTP22033 750 aa23.93■■□□□ 1.42
CCDC78-215ENST00000538176 RAB27AP51159 221 aa23.93■■□□□ 1.42
CCDC78-215ENST00000538176 EMC2Q15006 297 aa23.93■■□□□ 1.42
CCDC78-215ENST00000538176 TTC38Q5R3I4 469 aa23.93■■□□□ 1.42
CCDC78-215ENST00000538176 CATSPER4Q7RTX7 472 aa23.93■■□□□ 1.42
CCDC78-215ENST00000538176 KLHL23Q8NBE8 558 aa23.93■■□□□ 1.42
CCDC78-215ENST00000538176 SPPL3Q8TCT6 385 aa23.93■■□□□ 1.42
CCDC78-215ENST00000538176 PABPC5Q96DU9 382 aaKnown RBP23.93■■□□□ 1.42
CCDC78-215ENST00000538176 IFT122Q9HBG6 1241 aa23.93■■□□□ 1.42
CCDC78-215ENST00000538176 TNFRSF10AO00220 468 aa23.92■■□□□ 1.42
CCDC78-215ENST00000538176 NCBP1Q09161 790 aaKnown RBP23.92■■□□□ 1.42
CCDC78-215ENST00000538176 LAMTOR4Q0VGL1 99 aa23.92■■□□□ 1.42
CCDC78-215ENST00000538176 TFDP1Q14186 410 aa23.92■■□□□ 1.42
CCDC78-215ENST00000538176 TCEAL5Q5H9L2 206 aa23.92■■□□□ 1.42
CCDC78-215ENST00000538176 PDE12Q6L8Q7 609 aaKnown RBP23.92■■□□□ 1.42
CCDC78-215ENST00000538176 FERMT3Q86UX7 667 aa23.92■■□□□ 1.42
CCDC78-215ENST00000538176 ZNF579Q8NAF0 562 aaKnown RBP23.92■■□□□ 1.42
CCDC78-215ENST00000538176 TMEM143Q96AN5 459 aa23.92■■□□□ 1.42
CCDC78-215ENST00000538176 UHRF1Q96T88 793 aaPredicted RBP23.92■■□□□ 1.42
CCDC78-215ENST00000538176 POLR3CQ9BUI4 534 aaPredicted RBP23.92■■□□□ 1.42
CCDC78-215ENST00000538176 MRPL9Q9BYD2 267 aaKnown RBP23.92■■□□□ 1.42
CCDC78-215ENST00000538176 TMEM60Q9H2L4 133 aa23.92■■□□□ 1.42
CCDC78-215ENST00000538176 ALG13Q9NP73 1137 aaKnown RBP23.92■■□□□ 1.42
CCDC78-215ENST00000538176 TYW1Q9NV66 732 aaKnown RBP23.92■■□□□ 1.42
CCDC78-215ENST00000538176 FNDC1Q4ZHG4 1894 aaPredicted RBP23.92■■□□□ 1.42
CCDC78-215ENST00000538176 WNT7AO00755 349 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 ZNF623O75123 536 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 ITGB1P05556 798 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 TECP42680 631 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 GATMP50440 423 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 COL19A1Q14993 1142 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 ZNF174Q15697 407 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 LEXMQ3ZCV2 418 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 TWF2Q6IBS0 349 aaKnown RBP23.91■■□□□ 1.42
CCDC78-215ENST00000538176 ZNF598Q86UK7 904 aaKnown RBP23.91■■□□□ 1.42
CCDC78-215ENST00000538176 KSR1Q8IVT5 923 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 LRRC43Q8N309 656 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 TMX3Q96JJ7 454 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 CASD1Q96PB1 797 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 NACC1Q96RE7 527 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 RAB34Q9BZG1 259 aa23.91■■□□□ 1.42
CCDC78-215ENST00000538176 LAD1O00515 517 aa23.9■■□□□ 1.42
CCDC78-215ENST00000538176 CSDE1O75534 798 aaKnown RBP23.9■■□□□ 1.42
CCDC78-215ENST00000538176 SRGAP2CP0DJJ0 459 aa23.9■■□□□ 1.42
CCDC78-215ENST00000538176 FGFR1P11362 822 aa23.9■■□□□ 1.42
CCDC78-215ENST00000538176 FGFR4P22455 802 aa23.9■■□□□ 1.42
CCDC78-215ENST00000538176 RPA1P27694 616 aa23.9■■□□□ 1.42
CCDC78-215ENST00000538176 PHKA2P46019 1235 aa23.9■■□□□ 1.42
CCDC78-215ENST00000538176 RARRES1P49788 294 aa23.9■■□□□ 1.42
CCDC78-215ENST00000538176 PDIA5Q14554 519 aa23.9■■□□□ 1.42
CCDC78-215ENST00000538176 HAUS3Q68CZ6 603 aa23.9■■□□□ 1.42
CCDC78-215ENST00000538176 PGBD4Q96DM1 585 aa23.9■■□□□ 1.42
CCDC78-215ENST00000538176 TBC1D32Q96NH3 1257 aa23.9■■□□□ 1.42
CCDC78-215ENST00000538176 PUF60Q9UHX1 559 aaKnown RBP23.9■■□□□ 1.42
CCDC78-215ENST00000538176 DBR1Q9UK59 544 aaKnown RBP23.9■■□□□ 1.42
CCDC78-215ENST00000538176 PIN4Q9Y237 131 aaKnown RBP23.9■■□□□ 1.42
CCDC78-215ENST00000538176 VCANP13611 3396 aa23.9■■□□□ 1.42
CCDC78-215ENST00000538176 REV3LO60673 3130 aa23.89■■□□□ 1.42
CCDC78-215ENST00000538176 FSD2A1L4K1 749 aa23.89■■□□□ 1.41
CCDC78-215ENST00000538176 POTEMA6NI47 508 aa23.89■■□□□ 1.41
CCDC78-215ENST00000538176 ZBTB39O15060 712 aa23.89■■□□□ 1.41
CCDC78-215ENST00000538176 AXLP30530 894 aa23.89■■□□□ 1.41
CCDC78-215ENST00000538176 PPM1AP35813 382 aa23.89■■□□□ 1.41
CCDC78-215ENST00000538176 KCNQ1P51787 676 aa23.89■■□□□ 1.41
CCDC78-215ENST00000538176 CATSPER3Q86XQ3 398 aa23.89■■□□□ 1.41
CCDC78-215ENST00000538176 RNF149Q8NC42 400 aa23.89■■□□□ 1.41
CCDC78-215ENST00000538176 POF1BQ8WVV4 589 aa23.89■■□□□ 1.41
CCDC78-215ENST00000538176 CWH43Q9H720 699 aa23.89■■□□□ 1.41
CCDC78-215ENST00000538176 AGPAT5Q9NUQ2 364 aa23.89■■□□□ 1.41
CCDC78-215ENST00000538176 DAXXQ9UER7 740 aaPredicted RBP23.89■■□□□ 1.41
CCDC78-215ENST00000538176 FAM50BQ9Y247 325 aa23.89■■□□□ 1.41
CCDC78-215ENST00000538176 LZTS1Q9Y250 596 aa23.89■■□□□ 1.41
CCDC78-215ENST00000538176 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.89■■□□□ 1.41
CCDC78-215ENST00000538176 SPATA31C1P0DKV0 1188 aa23.88■■□□□ 1.41
CCDC78-215ENST00000538176 KCNA5P22460 613 aa23.88■■□□□ 1.41
CCDC78-215ENST00000538176 FXR2P51116 673 aaKnown RBP eCLIP23.88■■□□□ 1.41
CCDC78-215ENST00000538176 PLCB3Q01970 1234 aa23.88■■□□□ 1.41
CCDC78-215ENST00000538176 IFNLR1Q8IU57 520 aaPredicted RBP23.88■■□□□ 1.41
CCDC78-215ENST00000538176 THNSL1Q8IYQ7 743 aa23.88■■□□□ 1.41
CCDC78-215ENST00000538176 COLGALT1Q8NBJ5 622 aa23.88■■□□□ 1.41
CCDC78-215ENST00000538176 RNF169Q8NCN4 708 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms