RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 SBK1Q52WX2 424 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 CCDC178Q5BJE1 867 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 DALRD3Q5D0E6 543 aaKnown RBP12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 HGSNATQ68CP4 663 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 ANKRD40Q6AI12 368 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 LARGE2Q8N3Y3 721 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 SLC44A5Q8NCS7 719 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 PIGOQ8TEQ8 1089 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 BAP1Q92560 729 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 ESR2Q92731 530 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 OPTNQ96CV9 577 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 RNF26Q9BY78 433 aaPredicted RBP12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 CTTNBP2NLQ9P2B4 639 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 ATXN10Q9UBB4 475 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 SCOCQ9UIL1 159 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 TRIM33Q9UPN9 1127 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 ARL2BPQ9Y2Y0 163 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 BRCA1P38398 1863 aaKnown RBP12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 AGTP01019 485 aa12.27□□□□□ -0.45
SEMA4D-221ENST00000537934 KLRC1P26715 233 aa12.27□□□□□ -0.45
SEMA4D-221ENST00000537934 PICALMQ13492 652 aa12.27□□□□□ -0.45
SEMA4D-221ENST00000537934 VWA3BQ502W6 1294 aa12.27□□□□□ -0.45
SEMA4D-221ENST00000537934 FAM47AQ5JRC9 791 aa12.27□□□□□ -0.45
SEMA4D-221ENST00000537934 FOXB2Q5VYV0 432 aa12.27□□□□□ -0.45
SEMA4D-221ENST00000537934 PDXDC1Q6P996 788 aa12.27□□□□□ -0.45
SEMA4D-221ENST00000537934 FITM2Q8N6M3 262 aa12.27□□□□□ -0.45
SEMA4D-221ENST00000537934 EDEM3Q9BZQ6 932 aa12.27□□□□□ -0.45
SEMA4D-221ENST00000537934 SLITRK6Q9H5Y7 841 aa12.27□□□□□ -0.45
SEMA4D-221ENST00000537934 ATP8A1Q9Y2Q0 1164 aa12.27□□□□□ -0.45
SEMA4D-221ENST00000537934 NMT2O60551 498 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 RAD17O75943 681 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 FGRP09769 529 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 PLCG2P16885 1265 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 CRKP46108 304 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 SCNN1BP51168 640 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 SFSWAPQ12872 951 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 DBN1Q16643 649 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 APOBEC3HQ6NTF7 200 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 MYLK4Q86YV6 388 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 FANCBQ8NB91 859 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 TEKT1Q969V4 418 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 UTP4Q969X6 686 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 EEF2KMTQ96G04 330 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 FAM192AQ9GZU8 254 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 MMRN2Q9H8L6 949 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 DDX4Q9NQI0 724 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 ZNF232Q9UNY5 417 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 TNKSO95271 1327 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 RGS16O15492 202 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 UNC5CO95185 931 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 LONP1P36776 959 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 IFNAR2P48551 515 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 CNGA2Q16280 664 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 CROCCP2Q86T23 111 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 LCA5Q86VQ0 697 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 LONP2Q86WA8 852 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 RBBP8NLQ8NC74 664 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 NLGN2Q8NFZ4 835 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 TNFRSF25Q93038 417 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 NDNQ99608 321 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 AP1M1Q9BXS5 423 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 DDX47Q9H0S4 455 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 BCS1LQ9Y276 419 aa12.26□□□□□ -0.45
SEMA4D-221ENST00000537934 PGRMC1O00264 195 aaKnown RBP12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 CEP104O60308 925 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 CACNB3P54284 484 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 IFI35P80217 286 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 WTAPQ15007 396 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 C6orf118Q5T5N4 469 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 CDC42EP5Q6NZY7 148 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 ARHGAP27Q6ZUM4 889 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 TMTC2Q8N394 836 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 PROCA1Q8NCQ7 364 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 PHC3Q8NDX5 983 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 SH3TC2Q8TF17 1288 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 ANKS1AQ92625 1134 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 FMO2Q99518 471 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 EPB41L4BQ9H329 900 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 AZI2Q9H6S1 392 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 USP40Q9NVE5 1235 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 PRKAG3Q9UGI9 489 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 UTP11Q9Y3A2 253 aaKnown RBP12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 ECEL1O95672 775 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 PTDSS1P48651 473 aaKnown RBP12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 USP11P51784 963 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 CCDC15Q0P6D6 951 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 SLC9C1Q4G0N8 1177 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 DDX60LQ5H9U9 1706 aaKnown RBP12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 HHIPL2Q6UWX4 724 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 SYCP3Q8IZU3 236 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 ENAHQ8N8S7 591 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 SLC17A8Q8NDX2 589 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 PABPC3Q9H361 631 aaKnown RBP12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 ETNK1Q9HBU6 452 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 DISC1Q9NRI5 854 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 AMACRQ9UHK6 382 aa12.25□□□□□ -0.45
SEMA4D-221ENST00000537934 TMCO1Q9UM00 188 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms