RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 GRIK4Q16099 956 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 TPD52L1Q16890 204 aaPredicted RBP12.91□□□□□ -0.34
SPARC-207ENST00000537849 KIAA0753Q2KHM9 967 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 HSP90AA4PQ58FG1 418 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 LHX8Q68G74 356 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 MTHFD1LQ6UB35 978 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 STXBP4Q6ZWJ1 553 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 LRRC71Q8N4P6 559 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 CSGALNACT2Q8N6G5 542 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 TCP11Q8WWU5 503 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 PDLIM2Q96JY6 352 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 IFT74Q96LB3 600 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 NAP1L5Q96NT1 182 aaPredicted RBP12.91□□□□□ -0.34
SPARC-207ENST00000537849 SUGCTQ9HAC7 445 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 KMT5AQ9NQR1 393 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 SETD4Q9NVD3 440 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 ARHGAP28Q9P2N2 729 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 SUCLA2Q9P2R7 463 aaPredicted RBP12.91□□□□□ -0.34
SPARC-207ENST00000537849 LIMA1Q9UHB6 759 aaKnown RBP12.91□□□□□ -0.34
SPARC-207ENST00000537849 DDX20Q9UHI6 824 aaKnown RBP12.91□□□□□ -0.34
SPARC-207ENST00000537849 PTPN22Q9Y2R2 807 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 ZMYM2Q9UBW7 1377 aa12.91□□□□□ -0.34
SPARC-207ENST00000537849 ADGRA3Q8IWK6 1321 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 K7ENM7 598 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 ASAP2O43150 1006 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 SMIM10L2AP0DMW4 78 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 SMIM10L2BP0DMW5 78 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 NAMPTP43490 491 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 FKBP3Q00688 224 aaKnown RBP12.9□□□□□ -0.34
SPARC-207ENST00000537849 PLCB2Q00722 1185 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 LAMTOR4Q0VGL1 99 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 PPFIA1Q13136 1202 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 DMP1Q13316 513 aaPredicted RBP12.9□□□□□ -0.34
SPARC-207ENST00000537849 NFIL3Q16649 462 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 EDRF1Q3B7T1 1238 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 TCP11X2Q5H9J9 407 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 LRRC55Q6ZSA7 311 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 TAS1R3Q7RTX0 852 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 FILIP1Q7Z7B0 1213 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 ACCSQ96QU6 501 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 PPP1R9BQ96SB3 815 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 TSG101Q99816 390 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 MTG1Q9BT17 334 aaPredicted RBP12.9□□□□□ -0.34
SPARC-207ENST00000537849 KIFC3Q9BVG8 833 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 TRIM5Q9C035 493 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 SPC25Q9HBM1 224 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 XPNPEP3Q9NQH7 507 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 TYW1Q9NV66 732 aaKnown RBP12.9□□□□□ -0.34
SPARC-207ENST00000537849 DMAC2Q9NW81 257 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 TBX20Q9UMR3 447 aa12.9□□□□□ -0.34
SPARC-207ENST00000537849 CST5P28325 142 aaPredicted RBP12.89□□□□□ -0.35
SPARC-207ENST00000537849 HOXC8P31273 242 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 CLCN3P51790 818 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 ADAM9Q13443 819 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 CAPSQ13938 189 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 MXD4Q14582 209 aaPredicted RBP12.89□□□□□ -0.35
SPARC-207ENST00000537849 NR1I3Q14994 352 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 PPP2R5AQ15172 486 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 KCNA10Q16322 511 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 KIAA0319LQ8IZA0 1049 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 RETREG2Q8NC44 543 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 PPP1R13LQ8WUF5 828 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 TMEM174Q8WUU8 243 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 PSPC1Q8WXF1 523 aaKnown RBP12.89□□□□□ -0.35
SPARC-207ENST00000537849 HVCN1Q96D96 273 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 EEF2KMTQ96G04 330 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 CEP63Q96MT8 703 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 XPO4Q9C0E2 1151 aaKnown RBP12.89□□□□□ -0.35
SPARC-207ENST00000537849 TMEM134Q9H6X4 195 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 TMEM206Q9H813 350 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 HMX1Q9NP08 348 aaPredicted RBP12.89□□□□□ -0.35
SPARC-207ENST00000537849 IFNKQ9P0W0 207 aa12.89□□□□□ -0.35
SPARC-207ENST00000537849 NRCAMQ92823 1304 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 DENND3A2RUS2 1198 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 MBLAC1A4D2B0 266 aaPredicted RBP12.88□□□□□ -0.35
SPARC-207ENST00000537849 KCNJ18B7U540 433 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 ANKRD63C9JTQ0 380 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 CLIC2O15247 247 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 CALUO43852 315 aaPredicted RBP12.88□□□□□ -0.35
SPARC-207ENST00000537849 ZEB2O60315 1214 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 FGFR1OPO95684 399 aaKnown RBP12.88□□□□□ -0.35
SPARC-207ENST00000537849 GJB1P08034 283 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 SCP2P22307 547 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 DNM2P50570 870 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 UBASH3AP57075 661 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 SNRPFP62306 86 aaKnown RBP12.88□□□□□ -0.35
SPARC-207ENST00000537849 POU5F1BQ06416 359 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 KCNJ12Q14500 433 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 KRT31Q15323 416 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 CXCL17Q6UXB2 119 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 SLC9A9Q8IVB4 645 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 METTL13Q8N6R0 699 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 SH3TC2Q8TF17 1288 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 LMBR1Q8WVP7 490 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 MRFAP1L1Q96HT8 127 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 KATNAL1Q9BW62 490 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 GBP3Q9H0R5 595 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 INTS13Q9NVM9 706 aa12.88□□□□□ -0.35
SPARC-207ENST00000537849 HDAC6Q9UBN7 1215 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms