RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 GCFC2P16383 781 aaKnown RBP10.87□□□□□ -0.67
CHD4-207ENST00000537634 PBX3P40426 434 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 ERVFC1P60507 584 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 PSMC5P62195 406 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 SCRN1Q12765 414 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 DUSP6Q16828 381 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 CLLU1OSQ5K130 101 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 LRRC55Q6ZSA7 311 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 NEK8Q86SG6 692 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 ZNF410Q86VK4 478 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 RHPN2Q8IUC4 686 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 RNF135Q8IUD6 432 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 HELQQ8TDG4 1101 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 JPH2Q9BR39 696 aaPredicted RBP10.87□□□□□ -0.67
CHD4-207ENST00000537634 PHF20Q9BVI0 1012 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 MRPL9Q9BYD2 267 aaKnown RBP10.87□□□□□ -0.67
CHD4-207ENST00000537634 INO80BQ9C086 356 aaPredicted RBP10.87□□□□□ -0.67
CHD4-207ENST00000537634 NGRNQ9NPE2 291 aaKnown RBP10.87□□□□□ -0.67
CHD4-207ENST00000537634 CHST12Q9NRB3 414 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 SPG21Q9NZD8 308 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 SUCLA2Q9P2R7 463 aaPredicted RBP10.87□□□□□ -0.67
CHD4-207ENST00000537634 MUTYHQ9UIF7 546 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 A0A087WZ62 844 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 IGKV6-21A0A0C4DH24 114 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 MARCH6O60337 910 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 DKC1O60832 514 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHD4-207ENST00000537634 MAFO75444 373 aaPredicted RBP10.86□□□□□ -0.67
CHD4-207ENST00000537634 STBD1O95210 358 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 SKIP12755 728 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 RBM10P98175 930 aaKnown RBP10.86□□□□□ -0.67
CHD4-207ENST00000537634 PPP2R5CQ13362 524 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 HERC4Q5GLZ8 1057 aaPredicted RBP10.86□□□□□ -0.67
CHD4-207ENST00000537634 PLA2G4FQ68DD2 849 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 TWF2Q6IBS0 349 aaKnown RBP10.86□□□□□ -0.67
CHD4-207ENST00000537634 ANO5Q75V66 913 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 ZNF598Q86UK7 904 aaKnown RBP10.86□□□□□ -0.67
CHD4-207ENST00000537634 VN1R2Q8NFZ6 395 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 RSPH1Q8WYR4 309 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 FAM20AQ96MK3 541 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 NLRP4Q96MN2 994 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 CEP89Q96ST8 783 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 NAP1L4Q99733 375 aaKnown RBP10.86□□□□□ -0.67
CHD4-207ENST00000537634 FDXACB1Q9BRP7 624 aaPredicted RBP10.86□□□□□ -0.67
CHD4-207ENST00000537634 KCNMB3Q9NPA1 279 aa10.86□□□□□ -0.67
CHD4-207ENST00000537634 PIN4Q9Y237 131 aaKnown RBP10.86□□□□□ -0.67
CHD4-207ENST00000537634 EML1O00423 815 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 CCNT1O60563 726 aaKnown RBP10.85□□□□□ -0.67
CHD4-207ENST00000537634 PFKFB2O60825 505 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 ATF7P17544 494 aaPredicted RBP10.85□□□□□ -0.67
CHD4-207ENST00000537634 CA8P35219 290 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 TECP42680 631 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 PHKA2P46019 1235 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 QARSP47897 775 aaKnown RBP10.85□□□□□ -0.67
CHD4-207ENST00000537634 ALDH7A1P49419 539 aaKnown RBP10.85□□□□□ -0.67
CHD4-207ENST00000537634 RAB27AP51159 221 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 POLGP54098 1239 aaPredicted RBP10.85□□□□□ -0.67
CHD4-207ENST00000537634 SMC1AQ14683 1233 aaKnown RBP10.85□□□□□ -0.67
CHD4-207ENST00000537634 BMS1Q14692 1282 aaKnown RBP10.85□□□□□ -0.67
CHD4-207ENST00000537634 ANKRD1Q15327 319 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 PPP4R3AQ6IN85 833 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 LLGL2Q6P1M3 1020 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 GLB1LQ6UWU2 654 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 PIK3AP1Q6ZUJ8 805 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 CATSPER4Q7RTX7 472 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 TMC7Q7Z402 723 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 EXOC8Q8IYI6 725 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 SLC39A11Q8N1S5 342 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 SLC7A3Q8WY07 619 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 WASF1Q92558 559 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 TRAIPQ9BWF2 469 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 PHF7Q9BWX1 381 aaPredicted RBP10.85□□□□□ -0.67
CHD4-207ENST00000537634 CYP26B1Q9NR63 512 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 VAV3Q9UKW4 847 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 TPCN1Q9ULQ1 816 aa10.85□□□□□ -0.67
CHD4-207ENST00000537634 ARID2Q68CP9 1835 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 CARNS1A5YM72 827 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 HIDE1A8MVS5 230 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 LOC730098B7Z3J9 87 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 TBX3O15119 743 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 ZC3H11AO75152 810 aaKnown RBP eCLIP10.84□□□□□ -0.67
CHD4-207ENST00000537634 P4HBP07237 508 aaKnown RBP10.84□□□□□ -0.67
CHD4-207ENST00000537634 NPEPPSP55786 919 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 BCAR1P56945 870 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 ANAPC15P60006 121 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 CBX2Q14781 532 aaPredicted RBP10.84□□□□□ -0.67
CHD4-207ENST00000537634 ANKRD54Q6NXT1 300 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 TMEM184AQ6ZMB5 413 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 HFE2Q6ZVN8 426 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 KSR1Q8IVT5 923 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 OXER1Q8TDS5 423 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 PSPC1Q8WXF1 523 aaKnown RBP10.84□□□□□ -0.67
CHD4-207ENST00000537634 SUSD6Q92537 303 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 TMEM169Q96HH4 297 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 RPGRIP1Q96KN7 1286 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 CEP170P1Q96L14 293 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 LXNQ9BS40 222 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 BRMS1Q9HCU9 246 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 GJB4Q9NTQ9 266 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 FAM105AQ9NUU6 356 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 ORC3Q9UBD5 711 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms