RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 TNFAIP8L3Q5GJ75 292 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 C1orf228Q6PIY5 440 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 CCDC84Q86UT8 332 aaPredicted RBP9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 DNAJC1Q96KC8 554 aaKnown RBP9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 MAGEB18Q96M61 343 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 TUBB6Q9BUF5 446 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 NOC4LQ9BVI4 516 aaKnown RBP9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 BLZF1Q9H2G9 400 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 METTL5Q9NRN9 209 aaKnown RBP9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 HBS1LQ9Y450 684 aaKnown RBP9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 A0A0G2JLW4 131 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 E9PBE3 544 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 MAGEB3O15480 346 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 STK10O94804 968 aaKnown RBP9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 SLC1A4P43007 532 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 KLK7P49862 253 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 ARFIP2P53365 341 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 TBL3Q12788 808 aaKnown RBP9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 SLC29A2Q14542 456 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 TNNI3KQ59H18 835 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 MFSD5Q6N075 450 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 ARHGEF18Q6ZSZ5 1173 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 ACAD11Q709F0 780 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 BBS5Q8N3I7 341 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 ANKLE1Q8NAG6 615 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 KRT82Q9NSB4 513 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 SCHIP1Q9P0W5 487 aaPredicted RBP9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 RABL2BQ9UNT1 228 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 FPGT-TNNI3KV9GXZ4 949 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 TMEM120BA0PK00 339 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 ARHGAP10A1A4S6 786 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 GNAT3A8MTJ3 354 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 A8MXQ7 604 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 RBAK-RBAKDNI3L0D1 243 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 DDX3XO00571 662 aaKnown RBP eCLIP9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 ADCY3O60266 1144 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 CCDC22O60826 627 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 KRT36O76013 467 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 HOXB7P09629 217 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 TCF7P36402 384 aaPredicted RBP9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 CCT8P50990 548 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 GFPT1Q06210 699 aaPredicted RBP9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 ZNF449Q6P9G9 518 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 KLHL35Q6PF15 583 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 CSGALNACT2Q8N6G5 542 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 GDAP1Q8TB36 358 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 ANKS1AQ92625 1134 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 STAMQ92783 540 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 AP1M1Q9BXS5 423 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 NLRC4Q9NPP4 1024 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 SAR1AQ9NR31 198 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 KIAA1522Q9P206 1035 aaPredicted RBP9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 FAF1Q9UNN5 650 aaPredicted RBP9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 CARD8Q9Y2G2 431 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 NR2E3Q9Y5X4 410 aa9.15□□□□□ -0.95
SRGAP1-202ENST00000537556 XDHP47989 1333 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 TRIM49BA6NDI0 452 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 TTI1O43156 1089 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 ZBTB43O43298 467 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 HOXD11P31277 338 aaPredicted RBP9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 COG7P83436 770 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 RELAQ04206 551 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 ACSBG2Q5FVE4 666 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 ZNF362Q5T0B9 420 aaPredicted RBP9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 Q6ZNX1 250 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 PTF1AQ7RTS3 328 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 ZSCAN29Q8IWY8 852 aaPredicted RBP9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 TRIM22Q8IYM9 498 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 FNBP1Q96RU3 617 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 CCT7Q99832 543 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 ECSITQ9BQ95 431 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 SLC26A6Q9BXS9 759 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 MAK16Q9BXY0 300 aaKnown RBP9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 THEGQ9P2T0 379 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 PACSIN2Q9UNF0 486 aaPredicted RBP9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 TDRKHQ9Y2W6 561 aaKnown RBP9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 STARD13Q9Y3M8 1113 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 HEY1Q9Y5J3 304 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 NDUFB9Q9Y6M9 179 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 PITPNM2Q9BZ72 1349 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 BICDL2A1A5D9 508 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 IQCA1LA6NCM1 817 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 GRM8O00222 908 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 FBP2O00757 339 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 ZWINTO95229 277 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 PIM1P11309 404 aaPredicted RBP9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 ANTXR2P58335 489 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 PLCB3Q01970 1234 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 MED21Q13503 144 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 CAMK2BQ13554 666 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 ASTE1Q2TB18 679 aaPredicted RBP9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 CERKLQ49MI3 558 aaPredicted RBP9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 SLC9C1Q4G0N8 1177 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 TDRD12Q587J7 1177 aaKnown RBP9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 SYCP2LQ5T4T6 812 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 IZUMO2Q6UXV1 221 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 RRAGAQ7L523 313 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 SATL1Q86VE3 508 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 PALB2Q86YC2 1186 aa9.14□□□□□ -0.95
SRGAP1-202ENST00000537556 NEUROD6Q96NK8 337 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms