RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 DNM1Q05193 864 aaKnown RBP23.29■■□□□ 1.32
LPCAT3-204ENST00000536797 KARSQ15046 597 aaKnown RBP23.29■■□□□ 1.32
LPCAT3-204ENST00000536797 ASAP3Q8TDY4 903 aa23.29■■□□□ 1.32
LPCAT3-204ENST00000536797 LINC01599Q8WXQ3 324 aa23.29■■□□□ 1.32
LPCAT3-204ENST00000536797 TOP1MTQ969P6 601 aa23.29■■□□□ 1.32
LPCAT3-204ENST00000536797 TIFAQ96CG3 184 aa23.29■■□□□ 1.32
LPCAT3-204ENST00000536797 EPSTI1Q96J88 318 aa23.29■■□□□ 1.32
LPCAT3-204ENST00000536797 TSPYL2Q9H2G4 693 aaPredicted RBP23.29■■□□□ 1.32
LPCAT3-204ENST00000536797 IFT122Q9HBG6 1241 aa23.29■■□□□ 1.32
LPCAT3-204ENST00000536797 GPRC5CQ9NQ84 441 aa23.29■■□□□ 1.32
LPCAT3-204ENST00000536797 ATP6V1DQ9Y5K8 247 aa23.29■■□□□ 1.32
LPCAT3-204ENST00000536797 SZT2Q5T011 3432 aa23.29■■□□□ 1.32
LPCAT3-204ENST00000536797 TLL1O43897 1013 aa23.28■■□□□ 1.32
LPCAT3-204ENST00000536797 FGFR4P22455 802 aa23.28■■□□□ 1.32
LPCAT3-204ENST00000536797 GLRA2P23416 452 aa23.28■■□□□ 1.32
LPCAT3-204ENST00000536797 PHKA2P46019 1235 aa23.28■■□□□ 1.32
LPCAT3-204ENST00000536797 FAM117BQ6P1L5 589 aa23.28■■□□□ 1.32
LPCAT3-204ENST00000536797 SRGAP1Q7Z6B7 1085 aa23.28■■□□□ 1.32
LPCAT3-204ENST00000536797 KCNG4Q8TDN1 519 aa23.28■■□□□ 1.32
LPCAT3-204ENST00000536797 SYMPKQ92797 1274 aaKnown RBP23.28■■□□□ 1.32
LPCAT3-204ENST00000536797 CCDC39Q9UFE4 941 aa23.28■■□□□ 1.32
LPCAT3-204ENST00000536797 UPP2O95045 317 aa23.27■■□□□ 1.32
LPCAT3-204ENST00000536797 SSBP05455 408 aaKnown RBP eCLIP23.27■■□□□ 1.32
LPCAT3-204ENST00000536797 ZSCAN20P17040 1043 aaPredicted RBP23.27■■□□□ 1.32
LPCAT3-204ENST00000536797 PLCG1P19174 1290 aa23.27■■□□□ 1.32
LPCAT3-204ENST00000536797 POU5F1BQ06416 359 aa23.27■■□□□ 1.32
LPCAT3-204ENST00000536797 CAPSQ13938 189 aa23.27■■□□□ 1.32
LPCAT3-204ENST00000536797 ZNF697Q5TEC3 545 aa23.27■■□□□ 1.32
LPCAT3-204ENST00000536797 USP49Q70CQ1 688 aa23.27■■□□□ 1.32
LPCAT3-204ENST00000536797 RTN4RL1Q86UN2 441 aaPredicted RBP23.27■■□□□ 1.32
LPCAT3-204ENST00000536797 SYT2Q8N9I0 419 aaPredicted RBP23.27■■□□□ 1.32
LPCAT3-204ENST00000536797 ADAM2Q99965 735 aa23.27■■□□□ 1.32
LPCAT3-204ENST00000536797 C1orf112Q9NSG2 853 aa23.27■■□□□ 1.32
LPCAT3-204ENST00000536797 YBX2Q9Y2T7 364 aaKnown RBP23.27■■□□□ 1.32
LPCAT3-204ENST00000536797 TMEM265A0A087WTH1 108 aa23.26■■□□□ 1.31
LPCAT3-204ENST00000536797 MGEA5O60502 916 aa23.26■■□□□ 1.31
LPCAT3-204ENST00000536797 PLA2G4BP0C869 781 aa23.26■■□□□ 1.31
LPCAT3-204ENST00000536797 ANP32AP39687 249 aaKnown RBP23.26■■□□□ 1.31
LPCAT3-204ENST00000536797 RINT1Q6NUQ1 792 aa23.26■■□□□ 1.31
LPCAT3-204ENST00000536797 CATSPER4Q7RTX7 472 aa23.26■■□□□ 1.31
LPCAT3-204ENST00000536797 KIFAP3Q92845 792 aa23.26■■□□□ 1.31
LPCAT3-204ENST00000536797 NKX2-4Q9H2Z4 354 aa23.26■■□□□ 1.31
LPCAT3-204ENST00000536797 RGS18Q9NS28 235 aa23.26■■□□□ 1.31
LPCAT3-204ENST00000536797 TTC3P53804 2025 aa23.26■■□□□ 1.31
LPCAT3-204ENST00000536797 MYOGP15173 224 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 PTENP60484 403 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 NUCB2P80303 420 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 RAD9AQ99638 391 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 NFKBIZQ9BYH8 718 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 SLC28A3Q9HAS3 691 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 LRRIQ4A6NIV6 560 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 CUTAO60888 179 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 NCLP19338 710 aaKnown RBP23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 SLC12A3P55017 1021 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 KRT85P78386 507 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 DSC3Q14574 896 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 C1orf186Q6ZWK4 172 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 SLC24A5Q71RS6 500 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 IFNLR1Q8IU57 520 aaPredicted RBP23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 IFT74Q96LB3 600 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 RUSC1Q9BVN2 902 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 TIPINQ9BVW5 301 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 MINDY3Q9H8M7 445 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 CHST12Q9NRB3 414 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 RNF216Q9NWF9 866 aaPredicted RBP23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 KCND2Q9NZV8 630 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 INSL6Q9Y581 213 aa23.25■■□□□ 1.31
LPCAT3-204ENST00000536797 INO80B-WBP1J3KQ70 363 aa23.24■■□□□ 1.31
LPCAT3-204ENST00000536797 CA3P07451 260 aa23.24■■□□□ 1.31
LPCAT3-204ENST00000536797 STAG3L1P0CL83 205 aa23.24■■□□□ 1.31
LPCAT3-204ENST00000536797 SARSP49591 514 aaKnown RBP23.24■■□□□ 1.31
LPCAT3-204ENST00000536797 PPP2R5AQ15172 486 aa23.24■■□□□ 1.31
LPCAT3-204ENST00000536797 PCBP1Q15365 356 aaKnown RBP eCLIP23.24■■□□□ 1.31
LPCAT3-204ENST00000536797 NPAS4Q8IUM7 802 aa23.24■■□□□ 1.31
LPCAT3-204ENST00000536797 RAD54LQ92698 747 aa23.24■■□□□ 1.31
LPCAT3-204ENST00000536797 DRC1Q96MC2 740 aa23.24■■□□□ 1.31
LPCAT3-204ENST00000536797 YME1L1Q96TA2 773 aa23.24■■□□□ 1.31
LPCAT3-204ENST00000536797 BLOC1S4Q9NUP1 217 aa23.24■■□□□ 1.31
LPCAT3-204ENST00000536797 DACT1Q9NYF0 836 aa23.24■■□□□ 1.31
LPCAT3-204ENST00000536797 PIN4Q9Y237 131 aaKnown RBP23.24■■□□□ 1.31
LPCAT3-204ENST00000536797 HIP1RO75146 1068 aa23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 ERLIN2O94905 339 aa23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 IBSPP21815 317 aaPredicted RBP23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 GUCY2CP25092 1073 aa23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 NAMPTP43490 491 aa23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 ME1P48163 572 aa23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 HTRA4P83105 476 aaPredicted RBP23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 RRAGBQ5VZM2 374 aa23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 PPP2R2DQ66LE6 453 aa23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 ZBTB8OSQ8IWT0 167 aa23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 DEFB123Q8N688 67 aa23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 BSNDQ8WZ55 320 aa23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 LARP4BQ92615 738 aaKnown RBP23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 POLD4Q9HCU8 107 aa23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 RCOR1Q9UKL0 485 aa23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 LRFN2Q9ULH4 789 aa23.23■■□□□ 1.31
LPCAT3-204ENST00000536797 C9IYK1 514 aa23.22■■□□□ 1.31
LPCAT3-204ENST00000536797 DDIT3P35638 169 aa23.22■■□□□ 1.31
LPCAT3-204ENST00000536797 DHX8Q14562 1220 aaKnown RBP23.22■■□□□ 1.31
LPCAT3-204ENST00000536797 MCM6Q14566 821 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms