RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 FKBP1AP62942 108 aaKnown RBP8.46□□□□□ -1.06
CPSF7-216ENST00000536548 MRPS5P82675 430 aaKnown RBP8.46□□□□□ -1.06
CPSF7-216ENST00000536548 CHRNDQ07001 517 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 STK4Q13043 487 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 ITIH4Q14624 930 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 NONOQ15233 471 aaKnown RBP eCLIP8.46□□□□□ -1.06
CPSF7-216ENST00000536548 ASIC2Q16515 512 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 SLC18A3Q16572 532 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 TMEM266Q2M3C6 531 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 FAM153CQ494X1 144 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 ODF2Q5BJF6 829 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 CPLX4Q7Z7G2 160 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 SYCE1Q8N0S2 351 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 FUKQ8N0W3 1084 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 CCDC197Q8NCU1 140 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 TRIB2Q92519 343 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 MIEF2Q96C03 454 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 HOOK2Q96ED9 719 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 RSRC1Q96IZ7 334 aaKnown RBP8.46□□□□□ -1.06
CPSF7-216ENST00000536548 CDK5RAP3Q96JB5 506 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 SEC16BQ96JE7 1060 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 CEP63Q96MT8 703 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 PSMB7Q99436 277 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 TANGO6Q9C0B7 1094 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 SENP6Q9GZR1 1112 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-216ENST00000536548 ANKRD2Q9GZV1 360 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 NSRP1Q9H0G5 558 aaKnown RBP8.46□□□□□ -1.06
CPSF7-216ENST00000536548 C6orf50Q9HD87 102 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 PPANQ9NQ55 473 aaKnown RBP8.46□□□□□ -1.06
CPSF7-216ENST00000536548 ATP8A2Q9NTI2 1148 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 DDX20Q9UHI6 824 aaKnown RBP8.46□□□□□ -1.06
CPSF7-216ENST00000536548 FAM153AQ9UHL3 310 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 SLC12A6Q9UHW9 1150 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 TMEM59LQ9UK28 342 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 SERPINA10Q9UK55 444 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 GJD2Q9UKL4 321 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 PCDHA6Q9UN73 950 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 PCDHA8Q9Y5H6 950 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 BZW2Q9Y6E2 419 aaKnown RBP8.46□□□□□ -1.06
CPSF7-216ENST00000536548 MYO9BQ13459 2157 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 A0A1B0GUL6 1792 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 FAM86C2PA6NEL3 165 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 TSPY2A6NKD2 308 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 PP2D1A8MPX8 630 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 BHMG1C9JSJ3 638 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-216ENST00000536548 SLC26A4O43511 780 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 PRKAR2AP13861 404 aaKnown RBP8.45□□□□□ -1.06
CPSF7-216ENST00000536548 GNA11P29992 359 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 SCTRP47872 440 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 USP11P51784 963 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 CLNS1AP54105 237 aaKnown RBP8.45□□□□□ -1.06
CPSF7-216ENST00000536548 FKBP3Q00688 224 aaKnown RBP8.45□□□□□ -1.06
CPSF7-216ENST00000536548 SATB1Q01826 763 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 LMNB2Q03252 620 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 GFPT1Q06210 699 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-216ENST00000536548 ZNF844Q08AG5 666 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 INF2Q27J81 1249 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 CAVIN4Q5BKX8 364 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 MFSD14BQ5SR56 506 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 HGSNATQ68CP4 663 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 LHX8Q68G74 356 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 CRELD2Q6UXH1 353 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-216ENST00000536548 CEP57Q86XR8 500 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 STAG2Q8N3U4 1231 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 CEP120Q8N960 986 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 SCFD2Q8WU76 684 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 TBC1D22AQ8WUA7 517 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 BADQ92934 168 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 TATDN2Q93075 761 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 HVCN1Q96D96 273 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 MS4A14Q96JA4 679 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 HINFPQ9BQA5 517 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 RAB17Q9H0T7 212 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 STMN4Q9H169 189 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-216ENST00000536548 TMEM60Q9H2L4 133 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 C11orf16Q9NQ32 467 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 BARHL2Q9NY43 387 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 SMARCAL1Q9NZC9 954 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 EHD2Q9NZN4 543 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 ABCF2Q9UG63 623 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 DIS3Q9Y2L1 958 aaKnown RBP8.45□□□□□ -1.06
CPSF7-216ENST00000536548 COL4A3BPQ9Y5P4 624 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 MYO15AQ9UKN7 3530 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 FRMPD3Q5JV73 1810 aa8.45□□□□□ -1.06
CPSF7-216ENST00000536548 PTPRFP10586 1907 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 MYH6P13533 1939 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 MYH13Q9UKX3 1938 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 ESYT3A0FGR9 886 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 USP17L12C9JPN9 530 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 USP17L21D6R901 530 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 hCG_1984214I3L0E3 225 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 STXBP3O00186 592 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 ASAP2O43150 1006 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 MGRN1O60291 552 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 KIF4AO95239 1232 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 FTCDO95954 541 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 FCER1AP12319 257 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 CYP2B6P20813 491 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 CCND3P30281 292 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-216ENST00000536548 GBP1P32455 592 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms