RNA–Protein interactions for RNA: ENST00000536393.5

USP30-208, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-208ENST00000536393 RAB3IPQ96QF0 476 aaPredicted RBP7.21□□□□□ -1.26
USP30-208ENST00000536393 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.21□□□□□ -1.26
USP30-208ENST00000536393 WDR11Q9BZH6 1224 aa7.21□□□□□ -1.26
USP30-208ENST00000536393 COA1Q9GZY4 146 aa7.21□□□□□ -1.26
USP30-208ENST00000536393 DEFB129Q9H1M3 183 aa7.21□□□□□ -1.26
USP30-208ENST00000536393 EBF2Q9HAK2 575 aa7.21□□□□□ -1.26
USP30-208ENST00000536393 DDX20Q9UHI6 824 aaKnown RBP7.21□□□□□ -1.26
USP30-208ENST00000536393 SERPINB13Q9UIV8 391 aa7.21□□□□□ -1.26
USP30-208ENST00000536393 SALL4Q9UJQ4 1053 aa7.21□□□□□ -1.26
USP30-208ENST00000536393 CEP83Q9Y592 693 aa7.21□□□□□ -1.26
USP30-208ENST00000536393 AFF2P51816 1311 aa7.21□□□□□ -1.26
USP30-208ENST00000536393 SPATA31A5Q5VU36 1347 aa7.21□□□□□ -1.26
USP30-208ENST00000536393 SPATA31A7Q8IWB4 1347 aa7.21□□□□□ -1.26
USP30-208ENST00000536393 MYH4Q9Y623 1939 aa7.21□□□□□ -1.26
USP30-208ENST00000536393 hCG_1642624A0A1W2PR95 340 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 PP2D1A8MPX8 630 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 MYO1FO00160 1098 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 KIAA0391O15091 583 aaKnown RBP7.2□□□□□ -1.26
USP30-208ENST00000536393 EPHB6O15197 1021 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 RGS16O15492 202 aaPredicted RBP7.2□□□□□ -1.26
USP30-208ENST00000536393 PPIP5K2O43314 1243 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 BUB1O43683 1085 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 NMT2O60551 498 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 NR3C1P04150 777 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 KRT18P05783 430 aaKnown RBP7.2□□□□□ -1.26
USP30-208ENST00000536393 ABHD2P08910 425 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 ITIH2P19823 946 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 CCND1P24385 295 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 HOXA10P31260 410 aaPredicted RBP7.2□□□□□ -1.26
USP30-208ENST00000536393 ELF1P32519 619 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 GTF2H1P32780 548 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 BTDP43251 543 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 SCTRP47872 440 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 KLK7P49862 253 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 PMS2P54278 862 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 SLC7A5Q01650 507 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 ICA1Q05084 483 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 PTP4A2Q12974 167 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 IFT88Q13099 833 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 CALCOCO2Q13137 446 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 GIT2Q14161 759 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 PLS1Q14651 629 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 DPY19L2P1Q6NXN4 242 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 TMEM92Q6UXU6 159 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 NIPA1Q7RTP0 329 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 ZNF571Q7Z3V5 609 aaPredicted RBP7.2□□□□□ -1.26
USP30-208ENST00000536393 DAAM2Q86T65 1068 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 FAM133AQ8N9E0 248 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 ETNPPLQ8TBG4 499 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 RASGRP4Q8TDF6 673 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 LRRC15Q8TF66 581 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 TGFBRAP1Q8WUH2 860 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 UBLCP1Q8WVY7 318 aaPredicted RBP7.2□□□□□ -1.26
USP30-208ENST00000536393 KAT2BQ92831 832 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 HAS1Q92839 578 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 CELF1Q92879 486 aaKnown RBP7.2□□□□□ -1.26
USP30-208ENST00000536393 ZKSCAN4Q969J2 545 aaPredicted RBP7.2□□□□□ -1.26
USP30-208ENST00000536393 ZNF622Q969S3 477 aaKnown RBP eCLIP7.2□□□□□ -1.26
USP30-208ENST00000536393 SLC35C1Q96A29 364 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 BORCS6Q96GS4 357 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 TTC25Q96NG3 672 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 TRERF1Q96PN7 1200 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 CRAMP1Q96RY5 1269 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 PIGSQ96S52 555 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 SYT11Q9BT88 431 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 CCDC28BQ9BUN5 200 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 AMNQ9BXJ7 453 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 ANO3Q9BYT9 981 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 FRMD8P1Q9BZ68 369 aaPredicted RBP7.2□□□□□ -1.26
USP30-208ENST00000536393 LRRC19Q9H756 370 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 KANSL2Q9H9L4 492 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 C17orf75Q9HAS0 396 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 PARVGQ9HBI0 331 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 SLC40A1Q9NP59 571 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 SSU72Q9NP77 194 aaKnown RBP7.2□□□□□ -1.26
USP30-208ENST00000536393 INTS9Q9NV88 658 aaKnown RBP7.2□□□□□ -1.26
USP30-208ENST00000536393 DMAC2Q9NW81 257 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 NOP53Q9NZM5 478 aaKnown RBP7.2□□□□□ -1.26
USP30-208ENST00000536393 GCNT4Q9P109 453 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 APEX2Q9UBZ4 518 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 MCM8Q9UJA3 840 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 GGA1Q9UJY5 639 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 RTCBQ9Y3I0 505 aaKnown RBP7.2□□□□□ -1.26
USP30-208ENST00000536393 STRCQ7RTU9 1775 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 SBF2Q86WG5 1849 aa7.2□□□□□ -1.26
USP30-208ENST00000536393 BAZ2BQ9UIF8 2168 aaKnown RBP7.19□□□□□ -1.26
USP30-208ENST00000536393 CYP2D7A0A087X1C5 515 aa7.19□□□□□ -1.26
USP30-208ENST00000536393 KLRG2A4D1S0 409 aaPredicted RBP7.19□□□□□ -1.26
USP30-208ENST00000536393 USP17L3A6NCW0 530 aa7.19□□□□□ -1.26
USP30-208ENST00000536393 USP17L4A6NCW7 530 aa7.19□□□□□ -1.26
USP30-208ENST00000536393 SPDYE3A6NKU9 549 aa7.19□□□□□ -1.26
USP30-208ENST00000536393 H0YCG3 227 aa7.19□□□□□ -1.26
USP30-208ENST00000536393 SLC37A4O43826 429 aa7.19□□□□□ -1.26
USP30-208ENST00000536393 CTNND1O60716 968 aaKnown RBP7.19□□□□□ -1.26
USP30-208ENST00000536393 RTN2O75298 545 aa7.19□□□□□ -1.26
USP30-208ENST00000536393 CDH16O75309 829 aa7.19□□□□□ -1.26
USP30-208ENST00000536393 ZMYND10O75800 440 aa7.19□□□□□ -1.26
USP30-208ENST00000536393 GAS8O95995 478 aa7.19□□□□□ -1.26
USP30-208ENST00000536393 KRT13P13646 458 aa7.19□□□□□ -1.26
USP30-208ENST00000536393 TSHRP16473 764 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms