RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 LAG3P18627 525 aa3.95□□□□□ -1.78
SKA3-207ENST00000536239 ZEB1P37275 1124 aaPredicted RBP3.95□□□□□ -1.78
SKA3-207ENST00000536239 SUMO1P63165 101 aaKnown RBP3.95□□□□□ -1.78
SKA3-207ENST00000536239 DGKDQ16760 1214 aa3.95□□□□□ -1.78
SKA3-207ENST00000536239 DCAF17Q5H9S7 520 aaPredicted RBP3.95□□□□□ -1.78
SKA3-207ENST00000536239 KRT40Q6A162 431 aa3.95□□□□□ -1.78
SKA3-207ENST00000536239 CLEC14AQ86T13 490 aa3.95□□□□□ -1.78
SKA3-207ENST00000536239 RTN4RL1Q86UN2 441 aaPredicted RBP3.95□□□□□ -1.78
SKA3-207ENST00000536239 ZNF669Q96BR6 464 aaPredicted RBP3.95□□□□□ -1.78
SKA3-207ENST00000536239 FOXRED1Q96CU9 486 aaPredicted RBP3.95□□□□□ -1.78
SKA3-207ENST00000536239 FOXB1Q99853 325 aa3.95□□□□□ -1.78
SKA3-207ENST00000536239 KIAA1522Q9P206 1035 aaPredicted RBP3.95□□□□□ -1.78
SKA3-207ENST00000536239 TRIM24O15164 1050 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 SCAF4O95104 1147 aaKnown RBP3.94□□□□□ -1.78
SKA3-207ENST00000536239 RASGRP1O95267 797 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 JUNP05412 331 aaKnown RBP3.94□□□□□ -1.78
SKA3-207ENST00000536239 GNAT2P19087 354 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 USP14P54578 494 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 MFAP1P55081 439 aaKnown RBP3.94□□□□□ -1.78
SKA3-207ENST00000536239 GABREP78334 506 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 GNL2Q13823 731 aaKnown RBP3.94□□□□□ -1.78
SKA3-207ENST00000536239 SPIDRQ14159 915 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 FBXO42Q6P3S6 717 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 MCF2L2Q86YR7 1114 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 CMTM4Q8IZR5 234 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 SUPT20HQ8NEM7 779 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 OR5AN1Q8NGI8 311 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 MYEOVQ96EZ4 313 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 CDC6Q99741 560 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 ZNF768Q9H5H4 540 aaKnown RBP3.94□□□□□ -1.78
SKA3-207ENST00000536239 SPATA31A6Q5VVP1 1343 aa3.94□□□□□ -1.78
SKA3-207ENST00000536239 SLC12A8A0AV02 714 aa3.93□□□□□ -1.78
SKA3-207ENST00000536239 ADCY3O60266 1144 aa3.93□□□□□ -1.78
SKA3-207ENST00000536239 LPXNO60711 386 aa3.93□□□□□ -1.78
SKA3-207ENST00000536239 HK1P19367 917 aa3.93□□□□□ -1.78
SKA3-207ENST00000536239 RGS3P49796 1198 aa3.93□□□□□ -1.78
SKA3-207ENST00000536239 NPEPPSP55786 919 aa3.93□□□□□ -1.78
SKA3-207ENST00000536239 ARID5AQ03989 594 aa3.93□□□□□ -1.78
SKA3-207ENST00000536239 FAM209AQ5JX71 171 aa3.93□□□□□ -1.78
SKA3-207ENST00000536239 ZNF362Q5T0B9 420 aaPredicted RBP3.93□□□□□ -1.78
SKA3-207ENST00000536239 LRP10Q7Z4F1 713 aa3.93□□□□□ -1.78
SKA3-207ENST00000536239 APBB1IPQ7Z5R6 666 aaPredicted RBP3.93□□□□□ -1.78
SKA3-207ENST00000536239 FAM193BQ96PV7 902 aaPredicted RBP3.93□□□□□ -1.78
SKA3-207ENST00000536239 SERHL2Q9H4I8 314 aa3.93□□□□□ -1.78
SKA3-207ENST00000536239 NCDNQ9UBB6 729 aa3.93□□□□□ -1.78
SKA3-207ENST00000536239 SFMBT1Q9UHJ3 866 aa3.93□□□□□ -1.78
SKA3-207ENST00000536239 ZNF185O15231 689 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 DAPK3O43293 454 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 HIP1RO75146 1068 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 STC2O76061 302 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 PRLP01236 227 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 GYPEP15421 78 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 PTTG1IPP53801 180 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 SLC6A3Q01959 620 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 FOXB2Q5VYV0 432 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 SPATC1Q76KD6 591 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 OVCH1Q7RTY7 1134 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 HDGFL2Q7Z4V5 671 aaPredicted RBP3.92□□□□□ -1.78
SKA3-207ENST00000536239 SLC7A14Q8TBB6 771 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 WDR92Q96MX6 357 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 IPO9Q96P70 1041 aaKnown RBP3.92□□□□□ -1.78
SKA3-207ENST00000536239 SLC46A2Q9BY10 475 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 CELF4Q9BZC1 486 aaKnown RBP3.92□□□□□ -1.78
SKA3-207ENST00000536239 WDR11Q9BZH6 1224 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 KCNH6Q9H252 994 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 RSAD1Q9HA92 442 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 SYBUQ9NX95 663 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 KCMF1Q9P0J7 381 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 ANKFY1Q9P2R3 1169 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 COQ6Q9Y2Z9 468 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 INSL6Q9Y581 213 aa3.92□□□□□ -1.78
SKA3-207ENST00000536239 TMEM200CA6NKL6 621 aa3.91□□□□□ -1.78
SKA3-207ENST00000536239 AHRRA9YTQ3 701 aa3.91□□□□□ -1.78
SKA3-207ENST00000536239 PROB1E7EW31 1015 aa3.91□□□□□ -1.78
SKA3-207ENST00000536239 ERCC5P28715 1186 aaPredicted RBP3.91□□□□□ -1.78
SKA3-207ENST00000536239 KIR2DL3P43628 341 aa3.91□□□□□ -1.78
SKA3-207ENST00000536239 ROM1Q03395 351 aa3.91□□□□□ -1.78
SKA3-207ENST00000536239 PRR16Q569H4 304 aa3.91□□□□□ -1.78
SKA3-207ENST00000536239 CC2D1AQ6P1N0 951 aaPredicted RBP3.91□□□□□ -1.78
SKA3-207ENST00000536239 CCDC62Q6P9F0 684 aa3.91□□□□□ -1.78
SKA3-207ENST00000536239 MICALCLQ6ZW33 695 aa3.91□□□□□ -1.78
SKA3-207ENST00000536239 ARHGEF19Q8IW93 802 aa3.91□□□□□ -1.78
SKA3-207ENST00000536239 LCORLQ8N3X6 602 aa3.91□□□□□ -1.78
SKA3-207ENST00000536239 NELL1Q92832 810 aa3.91□□□□□ -1.78
SKA3-207ENST00000536239 E2F7Q96AV8 911 aa3.91□□□□□ -1.78
SKA3-207ENST00000536239 DYDC2Q96IM9 177 aa3.91□□□□□ -1.78
SKA3-207ENST00000536239 POLR3BQ9NW08 1133 aaPredicted RBP3.91□□□□□ -1.78
SKA3-207ENST00000536239 EIF2B4Q9UI10 523 aaKnown RBP3.91□□□□□ -1.78
SKA3-207ENST00000536239 EPN1Q9Y6I3 576 aaPredicted RBP3.91□□□□□ -1.78
SKA3-207ENST00000536239 ZBTB48P10074 688 aaPredicted RBP3.9□□□□□ -1.79
SKA3-207ENST00000536239 HNRNPLP14866 589 aaKnown RBP eCLIP3.9□□□□□ -1.79
SKA3-207ENST00000536239 TYRP1P17643 537 aa3.9□□□□□ -1.79
SKA3-207ENST00000536239 AVPR1BP47901 424 aa3.9□□□□□ -1.79
SKA3-207ENST00000536239 FAM189BP81408 668 aa3.9□□□□□ -1.79
SKA3-207ENST00000536239 RAB33AQ14088 237 aa3.9□□□□□ -1.79
SKA3-207ENST00000536239 METTL24Q5JXM2 366 aa3.9□□□□□ -1.79
SKA3-207ENST00000536239 IQSEC1Q6DN90 963 aa3.9□□□□□ -1.79
SKA3-207ENST00000536239 ZBTB38Q8NAP3 1195 aaPredicted RBP3.9□□□□□ -1.79
SKA3-207ENST00000536239 FAM98AQ8NCA5 519 aaKnown RBP3.9□□□□□ -1.79
SKA3-207ENST00000536239 MAML3Q96JK9 1138 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms