RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 ARMCX3Q9UH62 379 aaPredicted RBP23.01■■□□□ 1.27
PDXDC1-205ENST00000535621 FAM184BQ9ULE4 1060 aa23.01■■□□□ 1.27
PDXDC1-205ENST00000535621 HTTP42858 3142 aa23.01■■□□□ 1.27
PDXDC1-205ENST00000535621 RTP1P59025 263 aa23.01■■□□□ 1.27
PDXDC1-205ENST00000535621 TMEM161BQ8NDZ6 487 aa23.01■■□□□ 1.27
PDXDC1-205ENST00000535621 SPATA33Q96N06 139 aa23.01■■□□□ 1.27
PDXDC1-205ENST00000535621 ACCSQ96QU6 501 aa23.01■■□□□ 1.27
PDXDC1-205ENST00000535621 DMAC2Q9NW81 257 aa23.01■■□□□ 1.27
PDXDC1-205ENST00000535621 NOP56O00567 594 aaKnown RBP23■■□□□ 1.27
PDXDC1-205ENST00000535621 LGR5O75473 907 aa23■■□□□ 1.27
PDXDC1-205ENST00000535621 HOXC6P09630 235 aa23■■□□□ 1.27
PDXDC1-205ENST00000535621 SMTNP53814 917 aa23■■□□□ 1.27
PDXDC1-205ENST00000535621 CCDC155Q8N6L0 562 aa23■■□□□ 1.27
PDXDC1-205ENST00000535621 SPIRE2Q8WWL2 714 aa23■■□□□ 1.27
PDXDC1-205ENST00000535621 DHX33Q9H6R0 707 aaKnown RBP23■■□□□ 1.27
PDXDC1-205ENST00000535621 LUC7L2Q9Y383 392 aaKnown RBP23■■□□□ 1.27
PDXDC1-205ENST00000535621 EPB41P11171 864 aaKnown RBP22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 ARHGAP1Q07960 439 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 ACVR2BQ13705 512 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 EMC2Q15006 297 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 TMEM174Q8WUU8 243 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 LENG1Q96BZ8 264 aaPredicted RBP22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 PCMTD1Q96MG8 357 aaPredicted RBP22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 AZI2Q9H6S1 392 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 METTL14Q9HCE5 456 aaKnown RBP22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 NRBP2Q9NSY0 501 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 TRMT1Q9NXH9 659 aaKnown RBP22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 CEP350Q5VT06 3117 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 CCDC169A6NNP5 214 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 SMPD1P17405 629 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 RGS2P41220 211 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 POLGP54098 1239 aaPredicted RBP22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 TARBP2Q15633 366 aaKnown RBP22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 SLC9A9Q8IVB4 645 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 BORCS6Q96GS4 357 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 DNAJC7Q99615 494 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 MKNK1Q9BUB5 465 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 AGPAT5Q9NUQ2 364 aa22.99■■□□□ 1.27
PDXDC1-205ENST00000535621 A0A1W2PQJ5 194 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 RBM47A0AV96 593 aaKnown RBP22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 PSMC2P35998 433 aaKnown RBP22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 KCNMA1Q12791 1236 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 KCNH2Q12809 1159 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 IQCDQ96DY2 449 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 APBA2Q99767 749 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 KIFC3Q9BVG8 833 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 KMT5AQ9NQR1 393 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 SLC5A4Q9NY91 659 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 FCGRTP55899 365 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 PPP2R3AQ06190 1150 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 MYBPC2Q14324 1141 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 PLPPR4Q7Z2D5 763 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 OR8K1Q8NGG5 319 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 GLG1Q92896 1179 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 POLR3FQ9H1D9 316 aaPredicted RBP22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 ABHD16BQ9H3Z7 469 aa22.98■■□□□ 1.27
PDXDC1-205ENST00000535621 SOWAHDA6NJG2 315 aa22.97■■□□□ 1.27
PDXDC1-205ENST00000535621 XRCC5P13010 732 aaKnown RBP22.97■■□□□ 1.27
PDXDC1-205ENST00000535621 PRKCZQ05513 592 aa22.97■■□□□ 1.27
PDXDC1-205ENST00000535621 SOCS4Q8WXH5 440 aa22.97■■□□□ 1.27
PDXDC1-205ENST00000535621 SLC7A3Q8WY07 619 aa22.97■■□□□ 1.27
PDXDC1-205ENST00000535621 HVCN1Q96D96 273 aa22.97■■□□□ 1.27
PDXDC1-205ENST00000535621 FAM167AQ96KS9 214 aa22.97■■□□□ 1.27
PDXDC1-205ENST00000535621 FAM207AQ9NSI2 230 aaPredicted RBP22.97■■□□□ 1.27
PDXDC1-205ENST00000535621 CGNQ9P2M7 1197 aaKnown RBP22.97■■□□□ 1.27
PDXDC1-205ENST00000535621 TBX20Q9UMR3 447 aa22.97■■□□□ 1.27
PDXDC1-205ENST00000535621 EMSYQ7Z589 1322 aa22.97■■□□□ 1.27
PDXDC1-205ENST00000535621 THSD7BQ9C0I4 1608 aa22.97■■□□□ 1.27
PDXDC1-205ENST00000535621 TISP43B9A030 160 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 EPHB6O15197 1021 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 CYP2J2P51589 502 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 MAP4K3Q8IVH8 894 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 C12orf56Q8IXR9 622 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 FAM186BQ8IYM0 893 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 MMRN2Q9H8L6 949 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 ADGRA3Q8IWK6 1321 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 DENND3A2RUS2 1198 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 MARK3P27448 753 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 MAP2K2P36507 400 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 RFC5P40937 340 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 FLT3LGP49771 235 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 SNRPFP62306 86 aaKnown RBP22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 IRX5P78411 483 aaPredicted RBP22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 ZBED6P86452 979 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 SP3Q02447 781 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 BBXQ8WY36 941 aaPredicted RBP22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 SLC35C1Q96A29 364 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 PPP1R13BQ96KQ4 1090 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 IFT74Q96LB3 600 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 C16orf45Q96MC5 204 aaPredicted RBP22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 FRMD4BQ9Y2L6 1034 aa22.96■■□□□ 1.27
PDXDC1-205ENST00000535621 AFPP02771 609 aaKnown RBP22.95■■□□□ 1.26
PDXDC1-205ENST00000535621 ZNF865P0CJ78 1059 aaPredicted RBP22.95■■□□□ 1.26
PDXDC1-205ENST00000535621 LAMC2Q13753 1193 aa22.95■■□□□ 1.26
PDXDC1-205ENST00000535621 MTF1Q14872 753 aa22.95■■□□□ 1.26
PDXDC1-205ENST00000535621 DNTTIP2Q5QJE6 756 aaKnown RBP22.95■■□□□ 1.26
PDXDC1-205ENST00000535621 RAD9BQ6WBX8 426 aa22.95■■□□□ 1.26
PDXDC1-205ENST00000535621 TOGARAM2Q6ZUX3 1019 aa22.95■■□□□ 1.26
PDXDC1-205ENST00000535621 TMTC1Q8IUR5 882 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms