RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 DPP7Q9UHL4 492 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 ST3GAL5Q9UNP4 418 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 PCDHA2Q9Y5H9 948 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 CREBBPQ92793 2442 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 MGAQ8IWI9 3026 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 SMIM35A0A1B0GVV1 85 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 DENND3A2RUS2 1198 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 C4orf47A7E2U8 309 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 M0QZ92 97 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 INPPL1O15357 1258 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 NMT2O60551 498 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 KLRC2P26717 231 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 SATB1Q01826 763 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 NFX1Q12986 1120 aaKnown RBP8.71□□□□□ -1.02
CPSF7-214ENST00000535222 GAS6Q14393 721 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 PGM5Q15124 567 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 ODR4Q5SWX8 454 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 TPRG1Q6ZUI0 275 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 MTSS1LQ765P7 747 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 CYFIP1Q7L576 1253 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 AACSQ86V21 672 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 SAMD3Q8N6K7 520 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 SMG7Q92540 1137 aaKnown RBP8.71□□□□□ -1.02
CPSF7-214ENST00000535222 INPP4AQ96PE3 977 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-214ENST00000535222 SENP7Q9BQF6 1050 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 EMILIN2Q9BXX0 1053 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 NT5C3AQ9H0P0 336 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 MAN1C1Q9NR34 630 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 DKK4Q9UBT3 224 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.71□□□□□ -1.02
CPSF7-214ENST00000535222 NOC2LQ9Y3T9 749 aaKnown RBP8.71□□□□□ -1.02
CPSF7-214ENST00000535222 TELO2Q9Y4R8 837 aa8.71□□□□□ -1.02
CPSF7-214ENST00000535222 ITPR3Q14573 2671 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 DOCK6Q96HP0 2047 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 CCDC163A0A0D9SF12 145 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 NT5C1B-RDH14C9J2C7 533 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 MAN2B1O00754 1011 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 CDX4O14627 284 aaPredicted RBP8.7□□□□□ -1.02
CPSF7-214ENST00000535222 OPLAHO14841 1288 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 GPR182O15218 404 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 ABCB7O75027 752 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 RPS6KA5O75582 802 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 KRT38O76015 456 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 PDHBP11177 359 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 KRT76Q01546 638 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 ZNF543Q08ER8 600 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 SCAPQ12770 1279 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 DDX10Q13206 875 aaKnown RBP8.7□□□□□ -1.02
CPSF7-214ENST00000535222 SEMA3FQ13275 785 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 USH1GQ495M9 461 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 CLLU1OSQ5K130 101 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 PDXDC2PQ6P474 469 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 CACNA2D4Q7Z3S7 1137 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 TMEM40Q8WWA1 233 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 DNAJC2Q99543 621 aaKnown RBP8.7□□□□□ -1.02
CPSF7-214ENST00000535222 EDEM2Q9BV94 578 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 GPCPD1Q9NPB8 672 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 ZDHHC7Q9NXF8 308 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 ERAP1Q9NZ08 941 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 CDH7Q9ULB5 785 aa8.7□□□□□ -1.02
CPSF7-214ENST00000535222 A0A087WV48 116 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 CAPN8A6NHC0 703 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 SPDYE4A6NLX3 237 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 RFPL2O75678 378 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 BCAR3O75815 825 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 STAM2O75886 525 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 CHRNB1P11230 501 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 CA8P35219 290 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 MPLP40238 635 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 METAP2P50579 478 aaKnown RBP eCLIP8.69□□□□□ -1.02
CPSF7-214ENST00000535222 FGD1P98174 961 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 UTP14CQ5TAP6 766 aaKnown RBP8.69□□□□□ -1.02
CPSF7-214ENST00000535222 ZSCAN25Q6NSZ9 544 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 CEP68Q76N32 757 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 ZNF598Q86UK7 904 aaKnown RBP8.69□□□□□ -1.02
CPSF7-214ENST00000535222 ZNF280BQ86YH2 543 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 BCL7CQ8WUZ0 217 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-214ENST00000535222 DNASE1L2Q92874 299 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 PHKBQ93100 1093 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 TMEM47Q9BQJ4 181 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 MRPL9Q9BYD2 267 aaKnown RBP8.69□□□□□ -1.02
CPSF7-214ENST00000535222 PRKD2Q9BZL6 878 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 FAM49AQ9H0Q0 323 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-214ENST00000535222 ADAMTS10Q9H324 1103 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 SMOC1Q9H4F8 434 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 PLEKHA4Q9H4M7 779 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 LMAN1LQ9HAT1 526 aa8.69□□□□□ -1.02
CPSF7-214ENST00000535222 MRPL11Q9Y3B7 192 aaKnown RBP8.69□□□□□ -1.02
CPSF7-214ENST00000535222 C2CD3Q4AC94 2353 aa8.68□□□□□ -1.02
CPSF7-214ENST00000535222 LNP1A1A4G5 178 aa8.68□□□□□ -1.02
CPSF7-214ENST00000535222 UPK3BL1B0FP48 263 aa8.68□□□□□ -1.02
CPSF7-214ENST00000535222 PATL2C9JE40 543 aaKnown RBP8.68□□□□□ -1.02
CPSF7-214ENST00000535222 UPK3BL2E5RIL1 263 aa8.68□□□□□ -1.02
CPSF7-214ENST00000535222 MAP3K13O43283 966 aa8.68□□□□□ -1.02
CPSF7-214ENST00000535222 AKAP3O75969 853 aa8.68□□□□□ -1.02
CPSF7-214ENST00000535222 EFEMP2O95967 443 aa8.68□□□□□ -1.02
CPSF7-214ENST00000535222 FGRP09769 529 aa8.68□□□□□ -1.02
CPSF7-214ENST00000535222 CT47B1P0C2W7 299 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-214ENST00000535222 TOP1P11387 765 aaKnown RBP8.68□□□□□ -1.02
CPSF7-214ENST00000535222 MYCLP12524 364 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms