RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 DRP2Q13474 957 aa17.14■□□□□ 0.34
MCF2L-232ENST00000535094 TMEM119Q4V9L6 283 aa17.14■□□□□ 0.34
MCF2L-232ENST00000535094 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.34
MCF2L-232ENST00000535094 KIAA0825Q8IV33 1275 aa17.14■□□□□ 0.34
MCF2L-232ENST00000535094 KRT35Q92764 455 aa17.14■□□□□ 0.34
MCF2L-232ENST00000535094 SPDL1Q96EA4 605 aa17.14■□□□□ 0.34
MCF2L-232ENST00000535094 TYW1Q9NV66 732 aaKnown RBP17.14■□□□□ 0.34
MCF2L-232ENST00000535094 KLHL14Q9P2G3 628 aa17.14■□□□□ 0.34
MCF2L-232ENST00000535094 DISP2A7MBM2 1401 aa17.14■□□□□ 0.33
MCF2L-232ENST00000535094 SLC20A1Q8WUM9 679 aa17.14■□□□□ 0.33
MCF2L-232ENST00000535094 ZNF653Q96CK0 615 aa17.14■□□□□ 0.33
MCF2L-232ENST00000535094 IFT74Q96LB3 600 aa17.14■□□□□ 0.33
MCF2L-232ENST00000535094 PABPC3Q9H361 631 aaKnown RBP17.14■□□□□ 0.33
MCF2L-232ENST00000535094 SLC12A6Q9UHW9 1150 aa17.14■□□□□ 0.33
MCF2L-232ENST00000535094 TJP1Q07157 1748 aa17.14■□□□□ 0.33
MCF2L-232ENST00000535094 ANKRD62A6NC57 917 aa17.14■□□□□ 0.33
MCF2L-232ENST00000535094 POC1B-GALNT4F8VUJ3 575 aa17.14■□□□□ 0.33
MCF2L-232ENST00000535094 MYCNP04198 464 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-232ENST00000535094 GIT2Q14161 759 aa17.14■□□□□ 0.33
MCF2L-232ENST00000535094 TRAPPC3LQ5T215 181 aa17.14■□□□□ 0.33
MCF2L-232ENST00000535094 POP1Q99575 1024 aaKnown RBP17.14■□□□□ 0.33
MCF2L-232ENST00000535094 FAM129AQ9BZQ8 928 aa17.14■□□□□ 0.33
MCF2L-232ENST00000535094 TRIM6Q9C030 488 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-232ENST00000535094 K7ENM7 598 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 IGF2BP3O00425 579 aaKnown RBP eCLIP17.13■□□□□ 0.33
MCF2L-232ENST00000535094 DRD4P21917 467 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 SGO2Q562F6 1265 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 YTHDF3Q7Z739 585 aaKnown RBP17.13■□□□□ 0.33
MCF2L-232ENST00000535094 RPUSD2Q8IZ73 545 aaKnown RBP17.13■□□□□ 0.33
MCF2L-232ENST00000535094 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-232ENST00000535094 FOXN3O00409 490 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-232ENST00000535094 GAS7O60861 476 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 ERFP50548 548 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 EDRF1Q3B7T1 1238 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 FBXO11Q86XK2 927 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 SLC30A5Q8TAD4 765 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 RIOX1Q9H6W3 641 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 PASKQ96RG2 1323 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 RBAK-RBAKDNI3L0D1 243 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 KRT15P19012 456 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 SSTR3P32745 418 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-232ENST00000535094 PDE6CP51160 858 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 KCNJ2P63252 427 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 SP4Q02446 784 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 C2CD6Q53TS8 623 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 GPATCH4Q5T3I0 446 aaKnown RBP17.13■□□□□ 0.33
MCF2L-232ENST00000535094 ZNF365Q70YC5 407 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 PTF1AQ7RTS3 328 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 PALB2Q86YC2 1186 aa17.13■□□□□ 0.33
MCF2L-232ENST00000535094 INTS2Q9H0H0 1204 aaKnown RBP17.13■□□□□ 0.33
MCF2L-232ENST00000535094 TOM1O60784 492 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 ANP32DO95626 131 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 ATP6V1G2O95670 118 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 BRAFP15056 766 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 ADCY2Q08462 1091 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 MTM1Q13496 603 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 SETDB1Q15047 1291 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 CCDC6Q16204 474 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 KYNUQ16719 465 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 PREPLQ4J6C6 727 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-232ENST00000535094 ZCWPW2Q504Y3 356 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 LRCH2Q5VUJ6 765 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 SLC35C1Q96A29 364 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 PPP1R12CQ9BZL4 782 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 KCTD10Q9H3F6 313 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 DUOX1Q9NRD9 1551 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 IGSF9BQ9UPX0 1349 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 TMEM120BA0PK00 339 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 RASSF9O75901 435 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 UPP2O95045 317 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 COMTP21964 271 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 ELF3P78545 371 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-232ENST00000535094 TMED2Q15363 201 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 ARSHQ5FYA8 562 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 ALG3Q92685 438 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 DYDC2Q96IM9 177 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 DDX23Q9BUQ8 820 aaKnown RBP17.12■□□□□ 0.33
MCF2L-232ENST00000535094 WDR91A4D1P6 747 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 CLDN3O15551 220 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 ECEL1O95672 775 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 FMO5P49326 533 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 EPC2Q52LR7 807 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 KAZNQ674X7 775 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 SLC17A8Q8NDX2 589 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 ATG4AQ8WYN0 398 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 PARVGQ9HBI0 331 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 TRIM33Q9UPN9 1127 aa17.12■□□□□ 0.33
MCF2L-232ENST00000535094 ENO4A6NNW6 628 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 PDXKO00764 312 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 PPP1R11O60927 126 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-232ENST00000535094 SPAG7O75391 227 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 RPL21P46778 160 aaKnown RBP17.11■□□□□ 0.33
MCF2L-232ENST00000535094 MAPK7Q13164 816 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 GRAPQ13588 217 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 SHROOM1Q2M3G4 852 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-232ENST00000535094 LNX1Q8TBB1 728 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-232ENST00000535094 GRAPLQ8TC17 118 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-232ENST00000535094 YIPF3Q9GZM5 350 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 ETNK1Q9HBU6 452 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 CTNNAL1Q9UBT7 734 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms