RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 VPS16Q9H269 839 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 FAM114A2Q9NRY5 505 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 RAB21Q9UL25 225 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 SYNRGQ9UMZ2 1314 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.79□□□□□ -0.84
SF3B2-216ENST00000534765 SFI1A8K8P3 1242 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 PIK3CDO00329 1044 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 CHMP2AO43633 222 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 CTNND1O60716 968 aaKnown RBP9.79□□□□□ -0.84
SF3B2-216ENST00000534765 GJA5P36382 358 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 PBX1P40424 430 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 TBX2Q13207 712 aaPredicted RBP9.79□□□□□ -0.84
SF3B2-216ENST00000534765 TTI2Q6NXR4 508 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 RAD9BQ6WBX8 426 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 PROCA1Q8NCQ7 364 aaPredicted RBP9.79□□□□□ -0.84
SF3B2-216ENST00000534765 FBF1Q8TES7 1133 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 NELFBQ8WX92 580 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 CTNNBL1Q8WYA6 563 aaPredicted RBP9.79□□□□□ -0.84
SF3B2-216ENST00000534765 DDX12PQ92771 950 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 PCDHA12Q9UN75 941 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 AFG3L2Q9Y4W6 797 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 ADGRG1Q9Y653 693 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 TRAF5O00463 557 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 VWA5AO00534 786 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 DHX15O43143 795 aaKnown RBP9.79□□□□□ -0.84
SF3B2-216ENST00000534765 SLC12A3P55017 1021 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 CTTNQ14247 550 aaKnown RBP9.79□□□□□ -0.84
SF3B2-216ENST00000534765 CCDC38Q502W7 563 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 ZNF658Q5TYW1 1059 aaPredicted RBP9.79□□□□□ -0.84
SF3B2-216ENST00000534765 GIMAP8Q8ND71 665 aaPredicted RBP9.79□□□□□ -0.84
SF3B2-216ENST00000534765 MYCBPAPQ8TBZ2 947 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 RAD54LQ92698 747 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 ZNF214Q9UL59 606 aaPredicted RBP9.79□□□□□ -0.84
SF3B2-216ENST00000534765 BZW2Q9Y6E2 419 aaKnown RBP9.79□□□□□ -0.84
SF3B2-216ENST00000534765 hCG_1984214I3L0E3 225 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 DDX39AO00148 427 aaKnown RBP9.79□□□□□ -0.84
SF3B2-216ENST00000534765 FLOT1O75955 427 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 RHOBTB3O94955 611 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 DESP17661 470 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 TMOD1P28289 359 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 BACE1P56817 501 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 ATP11AP98196 1134 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 TMED1Q13445 227 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 TBC1D25Q3MII6 688 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 C8orf74Q6P047 294 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 SCYL3Q8IZE3 742 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 KIF2BQ8N4N8 673 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 ZNF713Q8N859 430 aaPredicted RBP9.79□□□□□ -0.84
SF3B2-216ENST00000534765 MIPOL1Q8TD10 442 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 RUSC1Q9BVN2 902 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 EPN3Q9H201 632 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 MCM3APO60318 1980 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 A0A0G2JMZ2 1700 aa9.79□□□□□ -0.84
SF3B2-216ENST00000534765 DYTNA2CJ06 578 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 CAPN15O75808 1086 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 PRPF6O94906 941 aaKnown RBP9.78□□□□□ -0.84
SF3B2-216ENST00000534765 ATP6V1G2O95670 118 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 HNRNPCP07910 306 aaKnown RBP eCLIP9.78□□□□□ -0.84
SF3B2-216ENST00000534765 ALAS1P13196 640 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 FNTAP49354 379 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 HSD17B4P51659 736 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 MOGSQ13724 837 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 KRT31Q15323 416 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 UGCGQ16739 394 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 OTOP1Q7RTM1 612 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 TRMT1LQ7Z2T5 733 aaKnown RBP9.78□□□□□ -0.84
SF3B2-216ENST00000534765 ARFGAP2Q8N6H7 521 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 UBLCP1Q8WVY7 318 aaPredicted RBP9.78□□□□□ -0.84
SF3B2-216ENST00000534765 GBP5Q96PP8 586 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 ZFATQ9P243 1243 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 ADD3Q9UEY8 706 aaKnown RBP9.78□□□□□ -0.84
SF3B2-216ENST00000534765 CCPG1Q9ULG6 757 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 C15orf41Q9Y2V0 281 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 LRRC37A2A6NM11 1700 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 EPHB6O15197 1021 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 PSMD10O75832 226 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 BMP15O95972 392 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 ICAM1P05362 532 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 RPS6P62753 249 aaKnown RBP9.78□□□□□ -0.84
SF3B2-216ENST00000534765 Q4G0T1 1027 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 B3GNT9Q6UX72 402 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 TC2NQ8N9U0 490 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 MLKLQ8NB16 471 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 DRAXINQ8NBI3 349 aaPredicted RBP9.78□□□□□ -0.84
SF3B2-216ENST00000534765 CYFIP2Q96F07 1278 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 ALS2CR12Q96Q35 445 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 C7orf25Q9BPX7 421 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 TAB2Q9NYJ8 693 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 SMARCAL1Q9NZC9 954 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 HIP1RO75146 1068 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 RTN2O75298 545 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 SLITRK3O94933 977 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 RTN3O95197 1032 aaPredicted RBP9.78□□□□□ -0.84
SF3B2-216ENST00000534765 KRT9P35527 623 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 SCTRP47872 440 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 KCNJ6P48051 423 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 IFNAR2P48551 515 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 FXR1P51114 621 aaKnown RBP eCLIP9.78□□□□□ -0.845e-7■■□□□ 14
SF3B2-216ENST00000534765 LARP4BQ92615 738 aaKnown RBP9.78□□□□□ -0.84
SF3B2-216ENST00000534765 UNC45AQ9H3U1 944 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms