RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 LPIN1Q14693 890 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 UGCGQ16739 394 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 Q4G0T1 1027 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 EARS2Q5JPH6 523 aaKnown RBP10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 ZNF484Q5JVG2 852 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 TMEM164Q5U3C3 297 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 SPRED2Q7Z698 418 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 NEK8Q86SG6 692 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 RIT2Q99578 217 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 NRBP2Q9NSY0 501 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 PLA2G2EQ9NZK7 142 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 PCDHA2Q9Y5H9 948 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 BTBD18B2RXH4 712 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 VTNP04004 478 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 JAK3P52333 1124 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 PRKCEQ02156 737 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 TAP1Q03518 808 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 NFX1Q12986 1120 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 GNL2Q13823 731 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 TMEM266Q2M3C6 531 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 FAM26DQ5JW98 314 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 FBXO47Q5MNV8 452 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 KRT40Q6A162 431 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 DIS3L2Q8IYB7 885 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 LRRC71Q8N4P6 559 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 FAM184AQ8NB25 1140 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 IL17RAQ96F46 866 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 ZNF668Q96K58 619 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 SCLT1Q96NL6 688 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 YME1L1Q96TA2 773 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 RAD9AQ99638 391 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 SH2D3AQ9BRG2 576 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 CELF4Q9BZC1 486 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 SUGCTQ9HAC7 445 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 DOLKQ9UPQ8 538 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 AKT3Q9Y243 479 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 TRPV2Q9Y5S1 764 aa10.05□□□□□ -0.8
CCDC90B-219ENST00000534753 CYP3A7-CYP3A51PA0A087WV96 503 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 SMIM35A0A1B0GVV1 85 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 TMEM150BA6NC51 233 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 PSMD10O75832 226 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 GJB5O95377 273 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 BAG4O95429 457 aaKnown RBP10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 MMP1P03956 469 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 CYP3A7P24462 503 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 SFNP31947 248 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 CLCN3P51790 818 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 CLDN10P78369 228 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 MGAT3Q09327 533 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 ST3GAL1Q11201 340 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 PAK2Q13177 524 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 ADGRE1Q14246 886 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 SAFBQ15424 915 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 KIZQ2M2Z5 673 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 MTERF2Q49AM1 385 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 NCAPH2Q6IBW4 605 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 EFCAB12Q6NXP0 572 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 TSHZ1Q6ZSZ6 1077 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 FAM177A1Q8N128 213 aaPredicted RBP10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 ETNPPLQ8TBG4 499 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 ZNF592Q92610 1267 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 APBB2Q92870 758 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 C8orf76Q96K31 380 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 FAM167AQ96KS9 214 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 ZSCAN31Q96LW9 406 aaPredicted RBP10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 KIF2CQ99661 725 aa10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 AGO3Q9H9G7 860 aaKnown RBP10.04□□□□□ -0.8
CCDC90B-219ENST00000534753 COL1A2P08123 1366 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 EPOPA6NHQ4 379 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 ZBTB42B2RXF5 422 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 EML1O00423 815 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 ZBTB24O43167 697 aaPredicted RBP10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 ZNF862O60290 1169 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 C22orf31O95567 290 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 GCFC2P16383 781 aaKnown RBP10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 TBC1D8BQ0IIM8 1120 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 EML3Q32P44 896 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 MOXD1Q6UVY6 613 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 RPAINQ86UA6 219 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 KIAA0319LQ8IZA0 1049 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 NME8Q8N427 588 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 USP38Q8NB14 1042 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 MAP7D2Q96T17 732 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 OSMRQ99650 979 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 NAP1L4Q99733 375 aaKnown RBP10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 PADI3Q9ULW8 664 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 CEP131Q9UPN4 1083 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 KIAA1024Q9UPX6 916 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 NOC2LQ9Y3T9 749 aaKnown RBP10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 INSL6Q9Y581 213 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 PTPRSQ13332 1948 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 IGSF9BQ9UPX0 1349 aa10.03□□□□□ -0.8
CCDC90B-219ENST00000534753 LINC01553A4QN01 128 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 ENPP3O14638 875 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 RPS6KA5O75582 802 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 CSPG5O95196 566 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 RPLP2P05387 115 aaKnown RBP10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 TMOD1P28289 359 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 MCM7P33993 719 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms