RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 UBE3AQ05086 875 aa26.03■■□□□ 1.76
YIF1A-213ENST00000534374 CTTNQ14247 550 aaKnown RBP26.03■■□□□ 1.76
YIF1A-213ENST00000534374 SPOUT1Q5T280 376 aaKnown RBP26.03■■□□□ 1.76
YIF1A-213ENST00000534374 TPH2Q8IWU9 490 aa26.03■■□□□ 1.76
YIF1A-213ENST00000534374 FBXO18Q8NFZ0 1043 aa26.03■■□□□ 1.76
YIF1A-213ENST00000534374 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.03■■□□□ 1.76
YIF1A-213ENST00000534374 NECAB3Q96P71 396 aaPredicted RBP26.03■■□□□ 1.76
YIF1A-213ENST00000534374 CASD1Q96PB1 797 aa26.03■■□□□ 1.76
YIF1A-213ENST00000534374 EIF2AK1Q9BQI3 630 aaKnown RBP26.03■■□□□ 1.76
YIF1A-213ENST00000534374 FOXP1Q9H334 677 aaPredicted RBP26.03■■□□□ 1.76
YIF1A-213ENST00000534374 ASAP2O43150 1006 aa26.02■■□□□ 1.76
YIF1A-213ENST00000534374 TXKP42681 527 aa26.02■■□□□ 1.76
YIF1A-213ENST00000534374 CTC1Q2NKJ3 1217 aa26.02■■□□□ 1.76
YIF1A-213ENST00000534374 ZNF598Q86UK7 904 aaKnown RBP26.02■■□□□ 1.76
YIF1A-213ENST00000534374 KSR1Q8IVT5 923 aa26.02■■□□□ 1.76
YIF1A-213ENST00000534374 POF1BQ8WVV4 589 aa26.02■■□□□ 1.76
YIF1A-213ENST00000534374 TCP11Q8WWU5 503 aa26.02■■□□□ 1.76
YIF1A-213ENST00000534374 CWH43Q9H720 699 aa26.02■■□□□ 1.76
YIF1A-213ENST00000534374 IFT122Q9HBG6 1241 aa26.02■■□□□ 1.76
YIF1A-213ENST00000534374 RNF19AQ9NV58 838 aa26.02■■□□□ 1.76
YIF1A-213ENST00000534374 COL4A3BPQ9Y5P4 624 aa26.02■■□□□ 1.76
YIF1A-213ENST00000534374 WNT7AO00755 349 aa26.01■■□□□ 1.75
YIF1A-213ENST00000534374 DNAJB1P25685 340 aa26.01■■□□□ 1.75
YIF1A-213ENST00000534374 GUCY1B3Q02153 619 aa26.01■■□□□ 1.75
YIF1A-213ENST00000534374 CYP4A11Q02928 519 aa26.01■■□□□ 1.75
YIF1A-213ENST00000534374 XKR9Q5GH70 373 aa26.01■■□□□ 1.75
YIF1A-213ENST00000534374 ABI1Q8IZP0 508 aa26.01■■□□□ 1.75
YIF1A-213ENST00000534374 PRPF31Q8WWY3 499 aaKnown RBP26.01■■□□□ 1.75
YIF1A-213ENST00000534374 PSPC1Q8WXF1 523 aaKnown RBP26.01■■□□□ 1.75
YIF1A-213ENST00000534374 RSPH1Q8WYR4 309 aa26.01■■□□□ 1.75
YIF1A-213ENST00000534374 PPP2R3CQ969Q6 453 aa26.01■■□□□ 1.75
YIF1A-213ENST00000534374 ZBTB39O15060 712 aa26■■□□□ 1.75
YIF1A-213ENST00000534374 SKIP12755 728 aa26■■□□□ 1.75
YIF1A-213ENST00000534374 XRCC6P12956 609 aaKnown RBP eCLIP26■■□□□ 1.75
YIF1A-213ENST00000534374 LAG3P18627 525 aa26■■□□□ 1.75
YIF1A-213ENST00000534374 HYAL1Q12794 435 aa26■■□□□ 1.75
YIF1A-213ENST00000534374 ORC2Q13416 577 aaPredicted RBP26■■□□□ 1.75
YIF1A-213ENST00000534374 SRGAP1Q7Z6B7 1085 aa26■■□□□ 1.75
YIF1A-213ENST00000534374 FAM184AQ8NB25 1140 aa26■■□□□ 1.75
YIF1A-213ENST00000534374 TMEM143Q96AN5 459 aa26■■□□□ 1.75
YIF1A-213ENST00000534374 NLRP4Q96MN2 994 aa26■■□□□ 1.75
YIF1A-213ENST00000534374 ANKEF1Q9NU02 776 aa26■■□□□ 1.75
YIF1A-213ENST00000534374 KIAA1671Q9BY89 1806 aa26■■□□□ 1.75
YIF1A-213ENST00000534374 RABEP1Q15276 862 aa25.99■■□□□ 1.75
YIF1A-213ENST00000534374 LRRC55Q6ZSA7 311 aa25.99■■□□□ 1.75
YIF1A-213ENST00000534374 COLGALT1Q8NBJ5 622 aa25.99■■□□□ 1.75
YIF1A-213ENST00000534374 C1QTNF1Q9BXJ1 281 aa25.99■■□□□ 1.75
YIF1A-213ENST00000534374 TMEM60Q9H2L4 133 aa25.99■■□□□ 1.75
YIF1A-213ENST00000534374 CLDND1Q9NY35 253 aa25.99■■□□□ 1.75
YIF1A-213ENST00000534374 GRXCR2A6NFK2 248 aa25.98■■□□□ 1.75
YIF1A-213ENST00000534374 ZNF623O75123 536 aa25.98■■□□□ 1.75
YIF1A-213ENST00000534374 FGF18O76093 207 aa25.98■■□□□ 1.75
YIF1A-213ENST00000534374 ATP2B1P20020 1258 aa25.98■■□□□ 1.75
YIF1A-213ENST00000534374 COL9A1P20849 921 aa25.98■■□□□ 1.75
YIF1A-213ENST00000534374 MCM7P33993 719 aa25.98■■□□□ 1.75
YIF1A-213ENST00000534374 LTBRP36941 435 aa25.98■■□□□ 1.75
YIF1A-213ENST00000534374 PHKA2P46019 1235 aa25.98■■□□□ 1.75
YIF1A-213ENST00000534374 LAMTOR4Q0VGL1 99 aa25.98■■□□□ 1.75
YIF1A-213ENST00000534374 EMC2Q15006 297 aa25.98■■□□□ 1.75
YIF1A-213ENST00000534374 PTCRAQ6ISU1 281 aaPredicted RBP25.98■■□□□ 1.75
YIF1A-213ENST00000534374 CATSPER4Q7RTX7 472 aa25.98■■□□□ 1.75
YIF1A-213ENST00000534374 FERMT3Q86UX7 667 aa25.98■■□□□ 1.75
YIF1A-213ENST00000534374 LRRC43Q8N309 656 aa25.98■■□□□ 1.75
YIF1A-213ENST00000534374 ATG2AQ2TAZ0 1938 aa25.97■■□□□ 1.75
YIF1A-213ENST00000534374 H3BQ06 376 aaPredicted RBP25.97■■□□□ 1.75
YIF1A-213ENST00000534374 SRGAP2CP0DJJ0 459 aa25.97■■□□□ 1.75
YIF1A-213ENST00000534374 ATF7P17544 494 aaPredicted RBP25.97■■□□□ 1.75
YIF1A-213ENST00000534374 PLCB3Q01970 1234 aa25.97■■□□□ 1.75
YIF1A-213ENST00000534374 MXD4Q14582 209 aaPredicted RBP25.97■■□□□ 1.75
YIF1A-213ENST00000534374 CLLU1OSQ5K130 101 aa25.97■■□□□ 1.75
YIF1A-213ENST00000534374 TWF2Q6IBS0 349 aaKnown RBP25.97■■□□□ 1.75
YIF1A-213ENST00000534374 PDE12Q6L8Q7 609 aaKnown RBP25.97■■□□□ 1.75
YIF1A-213ENST00000534374 EP400NLQ6ZTU2 488 aa25.97■■□□□ 1.75
YIF1A-213ENST00000534374 THNSL1Q8IYQ7 743 aa25.97■■□□□ 1.75
YIF1A-213ENST00000534374 RNF169Q8NCN4 708 aa25.97■■□□□ 1.75
YIF1A-213ENST00000534374 MTRQ99707 1265 aa25.97■■□□□ 1.75
YIF1A-213ENST00000534374 PIN4Q9Y237 131 aaKnown RBP25.97■■□□□ 1.75
YIF1A-213ENST00000534374 FAM50BQ9Y247 325 aa25.97■■□□□ 1.75
YIF1A-213ENST00000534374 LZTS1Q9Y250 596 aa25.97■■□□□ 1.75
YIF1A-213ENST00000534374 DGAT1O75907 488 aa25.96■■□□□ 1.75
YIF1A-213ENST00000534374 IRS1P35568 1242 aa25.96■■□□□ 1.75
YIF1A-213ENST00000534374 TRAPPC10P48553 1259 aa25.96■■□□□ 1.75
YIF1A-213ENST00000534374 POU5F1BQ06416 359 aa25.96■■□□□ 1.75
YIF1A-213ENST00000534374 ADAM15Q13444 863 aa25.96■■□□□ 1.75
YIF1A-213ENST00000534374 PCBP1Q15365 356 aaKnown RBP eCLIP25.96■■□□□ 1.75
YIF1A-213ENST00000534374 HCSTQ9UBK5 93 aa25.96■■□□□ 1.75
YIF1A-213ENST00000534374 PUF60Q9UHX1 559 aaKnown RBP25.96■■□□□ 1.75
YIF1A-213ENST00000534374 RAB27AP51159 221 aa25.95■■□□□ 1.74
YIF1A-213ENST00000534374 KCNT2Q6UVM3 1135 aa25.95■■□□□ 1.74
YIF1A-213ENST00000534374 NOSTRINQ8IVI9 506 aa25.95■■□□□ 1.74
YIF1A-213ENST00000534374 FAM178BQ8IXR5 827 aa25.95■■□□□ 1.74
YIF1A-213ENST00000534374 MICAL1Q8TDZ2 1067 aa25.95■■□□□ 1.74
YIF1A-213ENST00000534374 MRPL9Q9BYD2 267 aaKnown RBP25.95■■□□□ 1.74
YIF1A-213ENST00000534374 IGFLR1Q9H665 355 aa25.95■■□□□ 1.74
YIF1A-213ENST00000534374 XPNPEP1Q9NQW7 623 aa25.95■■□□□ 1.74
YIF1A-213ENST00000534374 TLR9Q9NR96 1032 aa25.95■■□□□ 1.74
YIF1A-213ENST00000534374 AGPAT5Q9NUQ2 364 aa25.95■■□□□ 1.74
YIF1A-213ENST00000534374 FAM105AQ9NUU6 356 aa25.95■■□□□ 1.74
YIF1A-213ENST00000534374 ST18O60284 1047 aa25.94■■□□□ 1.74
YIF1A-213ENST00000534374 SPATA31C1P0DKV0 1188 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms