RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 SH2D3AQ9BRG2 576 aa14.99□□□□□ -0.01
CAPN1-228ENST00000534373 FDXACB1Q9BRP7 624 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-228ENST00000534373 LLPHQ9BRT6 129 aaKnown RBP14.99□□□□□ -0.01
CAPN1-228ENST00000534373 LXNQ9BS40 222 aa14.99□□□□□ -0.01
CAPN1-228ENST00000534373 PUF60Q9UHX1 559 aaKnown RBP14.99□□□□□ -0.01
CAPN1-228ENST00000534373 JAK2O60674 1132 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 DTNBO60941 627 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 FGF18O76093 207 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 SLITRK3O94933 977 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 LYPLA2O95372 231 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 IL9P15248 144 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 PPM1AP35813 382 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 POLGP54098 1239 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-228ENST00000534373 NPEPPSP55786 919 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 SAFBQ15424 915 aaKnown RBP eCLIP14.98□□□□□ -0.01
CAPN1-228ENST00000534373 CALCRLQ16602 461 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 PLA2G4FQ68DD2 849 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 NCAPH2Q6IBW4 605 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 THNSL1Q8IYQ7 743 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 GJD3Q8N144 294 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 EFHBQ8N7U6 833 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 TCP11Q8WWU5 503 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 PSPC1Q8WXF1 523 aaKnown RBP14.98□□□□□ -0.01
CAPN1-228ENST00000534373 ZSCAN31Q96LW9 406 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-228ENST00000534373 HSD17B14Q9BPX1 270 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 TLR9Q9NR96 1032 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 RNF19AQ9NV58 838 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 RGL1Q9NZL6 768 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 WRAP73Q9P2S5 460 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-228ENST00000534373 COL4A3BPQ9Y5P4 624 aa14.98□□□□□ -0.01
CAPN1-228ENST00000534373 FAM205CA6NFA0 338 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 ZNF623O75123 536 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 XRCC6P12956 609 aaKnown RBP eCLIP14.97□□□□□ -0.01
CAPN1-228ENST00000534373 FGFR4P22455 802 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 IRS1P35568 1242 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 RAB27AP51159 221 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 KRT17Q04695 432 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 PCBP1Q15365 356 aaKnown RBP eCLIP14.97□□□□□ -0.01
CAPN1-228ENST00000534373 KCNT2Q6UVM3 1135 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 LRRC55Q6ZSA7 311 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 SRGAP1Q7Z6B7 1085 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 MICAL1Q8TDZ2 1067 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 PRPF31Q8WWY3 499 aaKnown RBP14.97□□□□□ -0.01
CAPN1-228ENST00000534373 DYDC2Q96IM9 177 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 MTMR9Q96QG7 549 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 CDCA3Q99618 268 aaPredicted RBP14.97□□□□□ -0.01
CAPN1-228ENST00000534373 MRPL9Q9BYD2 267 aaKnown RBP14.97□□□□□ -0.01
CAPN1-228ENST00000534373 IGFLR1Q9H665 355 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 TTC12Q9H892 705 aaPredicted RBP14.97□□□□□ -0.01
CAPN1-228ENST00000534373 IFT122Q9HBG6 1241 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 ANKEF1Q9NU02 776 aa14.97□□□□□ -0.01
CAPN1-228ENST00000534373 PI4K2BG5E9Z4 385 aa14.96□□□□□ -0.01
CAPN1-228ENST00000534373 NEMFO60524 1076 aa14.96□□□□□ -0.01
CAPN1-228ENST00000534373 CSDE1O75534 798 aaKnown RBP14.96□□□□□ -0.01
CAPN1-228ENST00000534373 PHKA2P46019 1235 aa14.96□□□□□ -0.01
CAPN1-228ENST00000534373 HMGN5P82970 282 aaKnown RBP14.96□□□□□ -0.01
CAPN1-228ENST00000534373 POU5F1BQ06416 359 aa14.96□□□□□ -0.01
CAPN1-228ENST00000534373 ORC2Q13416 577 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-228ENST00000534373 MXD4Q14582 209 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-228ENST00000534373 SMAD2Q15796 467 aaKnown RBP14.96□□□□□ -0.01
CAPN1-228ENST00000534373 XKR9Q5GH70 373 aa14.96□□□□□ -0.01
CAPN1-228ENST00000534373 CLLU1OSQ5K130 101 aa14.96□□□□□ -0.01
CAPN1-228ENST00000534373 TWF2Q6IBS0 349 aaKnown RBP14.96□□□□□ -0.01
CAPN1-228ENST00000534373 CATSPER4Q7RTX7 472 aa14.96□□□□□ -0.01
CAPN1-228ENST00000534373 KSR1Q8IVT5 923 aa14.96□□□□□ -0.01
CAPN1-228ENST00000534373 TPH2Q8IWU9 490 aa14.96□□□□□ -0.01
CAPN1-228ENST00000534373 ZNF579Q8NAF0 562 aaKnown RBP14.96□□□□□ -0.01
CAPN1-228ENST00000534373 MRPS27Q92552 414 aaKnown RBP14.96□□□□□ -0.01
CAPN1-228ENST00000534373 NLRP4Q96MN2 994 aa14.96□□□□□ -0.01
CAPN1-228ENST00000534373 ZNF558Q96NG5 402 aa14.96□□□□□ -0.01
CAPN1-228ENST00000534373 EIF2AK1Q9BQI3 630 aaKnown RBP14.96□□□□□ -0.01
CAPN1-228ENST00000534373 NGRNQ9NPE2 291 aaKnown RBP14.96□□□□□ -0.01
CAPN1-228ENST00000534373 SH2B1Q9NRF2 756 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-228ENST00000534373 KIAA1671Q9BY89 1806 aa14.96□□□□□ -0.01
CAPN1-228ENST00000534373 FSCN2O14926 492 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 MBTPS2O43462 519 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 EYA4O95677 639 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 ATF7P17544 494 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-228ENST00000534373 GTF2F1P35269 517 aaKnown RBP eCLIP14.95□□□□□ -0.024e-13■■■■□ 21.8
CAPN1-228ENST00000534373 NDUFV1P49821 464 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 DLX2Q07687 328 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-228ENST00000534373 LAMTOR4Q0VGL1 99 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 ST3GAL1Q11201 340 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 SMAD4Q13485 552 aaKnown RBP14.95□□□□□ -0.02
CAPN1-228ENST00000534373 CTTNQ14247 550 aaKnown RBP14.95□□□□□ -0.02
CAPN1-228ENST00000534373 ADHFE1Q8IWW8 467 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 RNF169Q8NCN4 708 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 PGBD4Q96DM1 585 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 C8orf76Q96K31 380 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 MSLNLQ96KJ4 702 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 FOXP1Q9H334 677 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-228ENST00000534373 TLE6Q9H808 572 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 CD320Q9NPF0 282 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 AGPAT5Q9NUQ2 364 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 FAM105AQ9NUU6 356 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 SPG21Q9NZD8 308 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 CD207Q9UJ71 328 aa14.95□□□□□ -0.02
CAPN1-228ENST00000534373 PIN4Q9Y237 131 aaKnown RBP14.95□□□□□ -0.02
CAPN1-228ENST00000534373 C19orf67A6NJJ6 358 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 TBX10O75333 385 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms