RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 RAPGEFL1Q9UHV5 662 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 PCDHGC5Q9Y5F6 944 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 TCF20Q9UGU0 1960 aaKnown RBP9.98□□□□□ -0.81
COPB1-211ENST00000534234 FAM205CA6NFA0 338 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 MBTPS2O43462 519 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 LARGE1O95461 756 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 SFPQP23246 707 aaKnown RBP eCLIP9.98□□□□□ -0.81
COPB1-211ENST00000534234 ERVFC1P60507 584 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 TMEM31Q5JXX7 168 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 CLLU1OSQ5K130 101 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 KCNT2Q6UVM3 1135 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 ZNF598Q86UK7 904 aaKnown RBP9.98□□□□□ -0.81
COPB1-211ENST00000534234 ZNF410Q86VK4 478 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 KSR1Q8IVT5 923 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 ADHFE1Q8IWW8 467 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 C4orf19Q8IY42 314 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 EXOC8Q8IYI6 725 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 SLFN12Q8IYM2 578 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 EFHBQ8N7U6 833 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 ZNF579Q8NAF0 562 aaKnown RBP9.98□□□□□ -0.81
COPB1-211ENST00000534234 NSUN7Q8NE18 718 aaKnown RBP9.98□□□□□ -0.81
COPB1-211ENST00000534234 SLC7A3Q8WY07 619 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 GTF3C6Q969F1 213 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 CEP170P1Q96L14 293 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 TLR9Q9NR96 1032 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 RGL1Q9NZL6 768 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 WRAP73Q9P2S5 460 aaPredicted RBP9.98□□□□□ -0.81
COPB1-211ENST00000534234 PUF60Q9UHX1 559 aaKnown RBP9.98□□□□□ -0.81
COPB1-211ENST00000534234 CD207Q9UJ71 328 aa9.98□□□□□ -0.81
COPB1-211ENST00000534234 C19orf67A6NJJ6 358 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 BTBD18B2RXH4 712 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 PER2O15055 1255 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 GPR37L1O60883 481 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 SEC24BO95487 1268 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 ALADP13716 330 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 POLGP54098 1239 aaPredicted RBP9.97□□□□□ -0.81
COPB1-211ENST00000534234 PLCB3Q01970 1234 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 KRT17Q04695 432 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 ZP2Q05996 745 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 TWF2Q6IBS0 349 aaKnown RBP9.97□□□□□ -0.81
COPB1-211ENST00000534234 NCAPH2Q6IBW4 605 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 PDE12Q6L8Q7 609 aaKnown RBP9.97□□□□□ -0.81
COPB1-211ENST00000534234 OTUD6AQ7L8S5 288 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 CATSPER4Q7RTX7 472 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 LRRC43Q8N309 656 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 HELQQ8TDG4 1101 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 PRPF31Q8WWY3 499 aaKnown RBP9.97□□□□□ -0.81
COPB1-211ENST00000534234 MRPS27Q92552 414 aaKnown RBP9.97□□□□□ -0.81
COPB1-211ENST00000534234 TNFRSF25Q93038 417 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 DYDC2Q96IM9 177 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 MSLNLQ96KJ4 702 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 NLRP4Q96MN2 994 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 ZNF558Q96NG5 402 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 LXNQ9BS40 222 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 DHX33Q9H6R0 707 aaKnown RBP9.97□□□□□ -0.81
COPB1-211ENST00000534234 ZSWIM4Q9H7M6 989 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 CLEC1BQ9P126 229 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 PCDHA12Q9UN75 941 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 LZTS1Q9Y250 596 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 PPME1Q9Y570 386 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 ZBTB39O15060 712 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 JAK2O60674 1132 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 SLITRK3O94933 977 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 EYA4O95677 639 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 SRGAP2CP0DJJ0 459 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 ATF7P17544 494 aaPredicted RBP9.97□□□□□ -0.81
COPB1-211ENST00000534234 YWHABP31946 246 aaKnown RBP9.97□□□□□ -0.81
COPB1-211ENST00000534234 PPM1AP35813 382 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 PBX3P40426 434 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 PHKA2P46019 1235 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 CYP4A11Q02928 519 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 SPIRE1Q08AE8 756 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 SMAD4Q13485 552 aaKnown RBP9.97□□□□□ -0.81
COPB1-211ENST00000534234 TRIM29Q14134 588 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 CTTNQ14247 550 aaKnown RBP9.97□□□□□ -0.81
COPB1-211ENST00000534234 XKR9Q5GH70 373 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 TPH2Q8IWU9 490 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 DIS3L2Q8IYB7 885 aaKnown RBP9.97□□□□□ -0.81
COPB1-211ENST00000534234 TMEM143Q96AN5 459 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 TRAIPQ9BWF2 469 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 IFT122Q9HBG6 1241 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 C11orf16Q9NQ32 467 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 SPG21Q9NZD8 308 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 BARX2Q9UMQ3 279 aaPredicted RBP9.97□□□□□ -0.81
COPB1-211ENST00000534234 PIN4Q9Y237 131 aaKnown RBP9.97□□□□□ -0.81
COPB1-211ENST00000534234 COL4A3BPQ9Y5P4 624 aa9.97□□□□□ -0.81
COPB1-211ENST00000534234 FAM86C2PA6NEL3 165 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 FSCN2O14926 492 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 ZNF623O75123 536 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 GLP2RO95838 553 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 SKIP12755 728 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 RFC5P40937 340 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 ALDH7A1P49419 539 aaKnown RBP9.96□□□□□ -0.82
COPB1-211ENST00000534234 FOSBP53539 338 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 RBM10P98175 930 aaKnown RBP9.96□□□□□ -0.82
COPB1-211ENST00000534234 LAMTOR4Q0VGL1 99 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 COASYQ13057 564 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 LONRF3Q496Y0 759 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 TMC7Q7Z402 723 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 PSPC1Q8WXF1 523 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms