RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 ZNF784Q8NCA9 323 aaPredicted RBP10.49□□□□□ -0.73
RTL1-201ENST00000534062 FGD4Q96M96 766 aa10.49□□□□□ -0.73
RTL1-201ENST00000534062 EIF3CQ99613 913 aaKnown RBP10.49□□□□□ -0.73
RTL1-201ENST00000534062 PCIF1Q9H4Z3 704 aa10.49□□□□□ -0.73
RTL1-201ENST00000534062 ATP6V0A4Q9HBG4 840 aa10.49□□□□□ -0.73
RTL1-201ENST00000534062 KMT5AQ9NQR1 393 aa10.49□□□□□ -0.73
RTL1-201ENST00000534062 SEPT11Q9NVA2 429 aaKnown RBP10.49□□□□□ -0.73
RTL1-201ENST00000534062 KIAA1217Q5T5P2 1943 aa10.49□□□□□ -0.73
RTL1-201ENST00000534062 HARSP12081 509 aaKnown RBP10.49□□□□□ -0.73
RTL1-201ENST00000534062 COPB1P53618 953 aaKnown RBP10.49□□□□□ -0.73
RTL1-201ENST00000534062 ZFYVE27Q5T4F4 411 aa10.49□□□□□ -0.73
RTL1-201ENST00000534062 TTI2Q6NXR4 508 aa10.49□□□□□ -0.73
RTL1-201ENST00000534062 LRRC8AQ8IWT6 810 aa10.49□□□□□ -0.73
RTL1-201ENST00000534062 TRAPPC12Q8WVT3 735 aa10.49□□□□□ -0.73
RTL1-201ENST00000534062 TUBGCP2Q9BSJ2 902 aa10.49□□□□□ -0.73
RTL1-201ENST00000534062 ARHGAP39Q9C0H5 1083 aa10.49□□□□□ -0.73
RTL1-201ENST00000534062 LUC7LQ9NQ29 371 aaKnown RBP10.49□□□□□ -0.73
RTL1-201ENST00000534062 MUTP22033 750 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 RGS2P41220 211 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 GRB14Q14449 540 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 KNOP1Q1ED39 458 aaKnown RBP10.48□□□□□ -0.73
RTL1-201ENST00000534062 SWT1Q5T5J6 900 aaKnown RBP10.48□□□□□ -0.73
RTL1-201ENST00000534062 LRRC71Q8N4P6 559 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 POLR3FQ9H1D9 316 aaPredicted RBP10.48□□□□□ -0.73
RTL1-201ENST00000534062 L2HGDHQ9H9P8 463 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 ANKEF1Q9NU02 776 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 ODF2LQ9ULJ1 636 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 SYNGAP1Q96PV0 1343 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 GSTTP1A0A1W2PQM5 241 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 CALUO43852 315 aaPredicted RBP10.48□□□□□ -0.73
RTL1-201ENST00000534062 FKBP3Q00688 224 aaKnown RBP10.48□□□□□ -0.73
RTL1-201ENST00000534062 TNFAIP2Q03169 654 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 TMCO3Q6UWJ1 677 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 SUGP1Q8IWZ8 645 aaKnown RBP10.48□□□□□ -0.73
RTL1-201ENST00000534062 HSD3B7Q9H2F3 369 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 ABHD16BQ9H3Z7 469 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 LOC285556D6RIA3 1793 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 CA12O43570 354 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 SRGAP2CP0DJJ0 459 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 ACTN2P35609 894 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 FCGRTP55899 365 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 VTA1Q9NP79 307 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 DBR1Q9UK59 544 aaKnown RBP10.48□□□□□ -0.73
RTL1-201ENST00000534062 ADAM21Q9UKJ8 722 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 DOCK5Q9H7D0 1870 aa10.48□□□□□ -0.73
RTL1-201ENST00000534062 KIF1CO43896 1103 aaKnown RBP10.47□□□□□ -0.73
RTL1-201ENST00000534062 EXOC3O60645 756 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 DGAT1O75907 488 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 LRRC63Q05C16 580 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 SMC1AQ14683 1233 aaKnown RBP10.47□□□□□ -0.73
RTL1-201ENST00000534062 EMC2Q15006 297 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 HAUS6Q7Z4H7 955 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.47□□□□□ -0.73
RTL1-201ENST00000534062 CEP120Q8N960 986 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 DEPTORQ8TB45 409 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 CAGE1Q8TC20 777 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 DUSP9Q99956 384 aaKnown RBP10.47□□□□□ -0.73
RTL1-201ENST00000534062 FAM155AB1AL88 458 aaPredicted RBP10.47□□□□□ -0.73
RTL1-201ENST00000534062 SNAI1O95863 264 aaPredicted RBP10.47□□□□□ -0.73
RTL1-201ENST00000534062 RPL13P26373 211 aaKnown RBP10.47□□□□□ -0.73
RTL1-201ENST00000534062 GSDMDP57764 484 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 ABRAQ8N0Z2 381 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 MCPH1Q8NEM0 835 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 ZBTB10Q96DT7 871 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 GPR20Q99678 358 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 GBP3Q9H0R5 595 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 THAP9Q9H5L6 903 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 KCND2Q9NZV8 630 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 DENND3A2RUS2 1198 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 ZNF18P17022 549 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 TRIM21P19474 475 aaKnown RBP10.47□□□□□ -0.73
RTL1-201ENST00000534062 ADKP55263 362 aaKnown RBP10.47□□□□□ -0.73
RTL1-201ENST00000534062 LAMC2Q13753 1193 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 C17orf99Q6UX52 265 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 KCTD17Q8N5Z5 321 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 CRACR2AQ9BSW2 395 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 TCHPQ9BT92 498 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 MAF1Q9H063 256 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 USP20Q9Y2K6 914 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 ALDH1A1P00352 501 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 PLS3P13797 630 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 ODF2Q5BJF6 829 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 CENPPQ6IPU0 288 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 NLRP4Q96MN2 994 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 AP5M1Q9H0R1 490 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 EPC1Q9H2F5 836 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 SMARCAD1Q9H4L7 1026 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 TSKSQ9UJT2 592 aa10.47□□□□□ -0.73
RTL1-201ENST00000534062 HNRNPDLO14979 420 aaKnown RBP10.46□□□□□ -0.73
RTL1-201ENST00000534062 SKILP12757 684 aa10.46□□□□□ -0.73
RTL1-201ENST00000534062 MAP2K2P36507 400 aa10.46□□□□□ -0.73
RTL1-201ENST00000534062 KIAA1328Q86T90 577 aa10.46□□□□□ -0.73
RTL1-201ENST00000534062 VTI1AQ96AJ9 217 aa10.46□□□□□ -0.73
RTL1-201ENST00000534062 SEL1LQ9UBV2 794 aa10.46□□□□□ -0.73
RTL1-201ENST00000534062 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.46□□□□□ -0.73
RTL1-201ENST00000534062 TRPM7Q96QT4 1865 aa10.46□□□□□ -0.73
RTL1-201ENST00000534062 GOLGA8IPA6NC78 632 aa10.46□□□□□ -0.74
RTL1-201ENST00000534062 GOLGA8JA6NMD2 632 aa10.46□□□□□ -0.74
RTL1-201ENST00000534062 MYL3P08590 195 aa10.46□□□□□ -0.74
RTL1-201ENST00000534062 EPB41P11171 864 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms