RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 POLIQ9UNA4 740 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 PHLPP1O60346 1717 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 C17orf102A2RUQ5 167 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 WNT10BO00744 389 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 TDP2O95551 362 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 PEX19P40855 299 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 ZNF484Q5JVG2 852 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 GPD1LQ8N335 351 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 RNF149Q8NC42 400 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 DNERQ8NFT8 737 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 EPSTI1Q96J88 318 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 GBP5Q96PP8 586 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 PPME1Q9Y570 386 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 MAP2P11137 1827 aaKnown RBP12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 CASQ2O14958 399 aaPredicted RBP12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 SH3BP5O60239 455 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 HIP1RO75146 1068 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 HEXIM1O94992 359 aaKnown RBP12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 RECQLP46063 649 aaPredicted RBP12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 KNOP1Q1ED39 458 aaKnown RBP12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 DUOXA2Q1HG44 320 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 MOXD1Q6UVY6 613 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 FAM71BQ8TC56 605 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 LMCD1Q9NZU5 365 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 E9PMD0 336 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 MSCO60682 206 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 LARGE1O95461 756 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 HSPA6P17066 643 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 MUTP22033 750 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 KLRK1P26718 216 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 CDC25AP30304 524 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 PSMC4P43686 418 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 STILQ15468 1287 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 DEFB115Q30KQ5 88 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 TACO1Q9BSH4 297 aaKnown RBP12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 CCSER1Q9C0I3 900 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 JRKLQ9Y4A0 524 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 PDHXO00330 501 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 PRPSAP2O60256 369 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 DTNBO60941 627 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 CD4P01730 458 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 NNMTP40261 264 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 UAP1Q16222 522 aaPredicted RBP12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 GEN1Q17RS7 908 aa12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 GLIS2Q9BZE0 524 aaPredicted RBP12.11□□□□□ -0.47
AMBRA1-211ENST00000533727 SYNJ2BP-COX16A0A087WUM0 186 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 COASYQ13057 564 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 LRRC31Q6UY01 552 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 ERICH1Q86X53 443 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 YAF2Q8IY57 180 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 COX16Q9P0S2 106 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 AGO2Q9UKV8 859 aaKnown RBP12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 STAP1Q9ULZ2 295 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 GDAQ9Y2T3 454 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 UBE4BO95155 1302 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 ABCC6O95255 1503 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 CPB1P15086 417 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 CD58P19256 250 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 ZBED6P86452 979 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 HAUS6Q7Z4H7 955 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 GUF1Q8N442 669 aaKnown RBP12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 RYBPQ8N488 228 aaPredicted RBP12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 PHF20Q9BVI0 1012 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 CAPS2Q9BXY5 557 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 NDST4Q9H3R1 872 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 PPANQ9NQ55 473 aaKnown RBP12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 HOMER3Q9NSC5 361 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 COL14A1Q05707 1796 aaKnown RBP12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 GOLGA8IPA6NC78 632 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 GOLGA8JA6NMD2 632 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 MAP7Q14244 749 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 ZMYND12Q9H0C1 365 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 C17orf75Q9HAS0 396 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 ANAPC5Q9UJX4 755 aa12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 POLR1AO95602 1720 aaPredicted RBP12.1□□□□□ -0.47
AMBRA1-211ENST00000533727 H7C0C1 242 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 ATP5OP48047 213 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 TPD52P55327 224 aaPredicted RBP12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 HERVK_113P62684 666 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 RPS6P62753 249 aaKnown RBP12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 COG7P83436 770 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 NFIAQ12857 509 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 GKAP1Q5VSY0 366 aaPredicted RBP12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 SCN4BQ8IWT1 228 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 FAM213AQ9BRX8 229 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 FMN2Q9NZ56 1722 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 SLIT3O75094 1523 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 POTEFA5A3E0 1075 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 IL18RAPO95256 599 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 CALB1P05937 261 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 POTEIP0CG38 1075 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 ITGA4P13612 1032 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 VCAM1P19320 739 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 DSG3P32926 999 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 ZNF131P52739 623 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 KRT17Q04695 432 aa12.09□□□□□ -0.47
AMBRA1-211ENST00000533727 POTEGQ6S5H5 508 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms