RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 SLC7A3Q8WY07 619 aa13.91□□□□□ -0.18
CAPRIN1-213ENST00000533562 SH2D3AQ9BRG2 576 aa13.91□□□□□ -0.18
CAPRIN1-213ENST00000533562 FDXACB1Q9BRP7 624 aaPredicted RBP13.91□□□□□ -0.18
CAPRIN1-213ENST00000533562 CWH43Q9H720 699 aa13.91□□□□□ -0.18
CAPRIN1-213ENST00000533562 CYP26B1Q9NR63 512 aa13.91□□□□□ -0.18
CAPRIN1-213ENST00000533562 CD207Q9UJ71 328 aa13.91□□□□□ -0.18
CAPRIN1-213ENST00000533562 VAV3Q9UKW4 847 aa13.91□□□□□ -0.18
CAPRIN1-213ENST00000533562 LZTS1Q9Y250 596 aa13.91□□□□□ -0.18
CAPRIN1-213ENST00000533562 FNDC1Q4ZHG4 1894 aaPredicted RBP13.91□□□□□ -0.18
CAPRIN1-213ENST00000533562 LINC01565O15544 149 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 GPR37L1O60883 481 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 CSDE1O75534 798 aaKnown RBP13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 SKIP12755 728 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 FDPSP14324 419 aaKnown RBP13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 FGFR4P22455 802 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 PPM1AP35813 382 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 PLCB3Q01970 1234 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 SMAD4Q13485 552 aaKnown RBP13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 TRIM29Q14134 588 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 EPHA7Q15375 998 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 SMAD2Q15796 467 aaKnown RBP13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 CLUL1Q15846 466 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 ME3Q16798 604 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 C4orf19Q8IY42 314 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 RSPH1Q8WYR4 309 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 HAS1Q92839 578 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 KHSRPQ92945 711 aaKnown RBP eCLIP13.9□□□□□ -0.182e-6■■■□□ 18.2
CAPRIN1-213ENST00000533562 GTF3C6Q969F1 213 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 CEP170P1Q96L14 293 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 POP1Q99575 1024 aaKnown RBP13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 CDCA3Q99618 268 aaPredicted RBP13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 TRAIPQ9BWF2 469 aa13.9□□□□□ -0.18
CAPRIN1-213ENST00000533562 MBTPS2O43462 519 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 TBX10O75333 385 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 RFC5P40937 340 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 POLGP54098 1239 aaPredicted RBP13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 ERVFC1P60507 584 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 ZP2Q05996 745 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 NR5A1Q13285 461 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 PLA2G4FQ68DD2 849 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 TWF2Q6IBS0 349 aaKnown RBP13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 KCNT2Q6UVM3 1135 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 LRRC55Q6ZSA7 311 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 ADGRD2Q7Z7M1 963 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 ZNF598Q86UK7 904 aaKnown RBP13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 MRPS27Q92552 414 aaKnown RBP13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 NLRP4Q96MN2 994 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 ZNF558Q96NG5 402 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 LRFN3Q9BTN0 628 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 MRPL9Q9BYD2 267 aaKnown RBP13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 ZSWIM4Q9H7M6 989 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 SPG21Q9NZD8 308 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 PCDHA12Q9UN75 941 aa13.89□□□□□ -0.19
CAPRIN1-213ENST00000533562 CARNS1A5YM72 827 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 C19orf67A6NJJ6 358 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 ASAP2O43150 1006 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 GAS2O43903 313 aaKnown RBP13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 DTNBO60941 627 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 EYA4O95677 639 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 YWHABP31946 246 aaKnown RBP13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 PHKA2P46019 1235 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 ALDH7A1P49419 539 aaKnown RBP13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 NPEPPSP55786 919 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 COASYQ13057 564 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 EARS2Q5JPH6 523 aaKnown RBP13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 CLLU1OSQ5K130 101 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 NCAPH2Q6IBW4 605 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 CATSPER4Q7RTX7 472 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 KSR1Q8IVT5 923 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 NSUN7Q8NE18 718 aaKnown RBP13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 TCP11Q8WWU5 503 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 PRPF31Q8WWY3 499 aaKnown RBP13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 PSPC1Q8WXF1 523 aaKnown RBP13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 MSLNLQ96KJ4 702 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 LXNQ9BS40 222 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 NGRNQ9NPE2 291 aaKnown RBP13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 RNF19AQ9NV58 838 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 CLEC1BQ9P126 229 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 HCSTQ9UBK5 93 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 PIN4Q9Y237 131 aaKnown RBP13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 COL4A3BPQ9Y5P4 624 aa13.88□□□□□ -0.19
CAPRIN1-213ENST00000533562 KIAA1671Q9BY89 1806 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 BTBD18B2RXH4 712 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 FSCN2O14926 492 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 PER2O15055 1255 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 SRGAP2CP0DJJ0 459 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 SRGAP2BP0DMP2 458 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 RAB27AP51159 221 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 BMS1Q14692 1282 aaKnown RBP13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 CALCRLQ16602 461 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 TMC7Q7Z402 723 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 TPH2Q8IWU9 490 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 HELQQ8TDG4 1101 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 TNFRSF25Q93038 417 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 DYDC2Q96IM9 177 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 TCF25Q9BQ70 676 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 DHX33Q9H6R0 707 aaKnown RBP13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 IFT122Q9HBG6 1241 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 ENTPD7Q9NQZ7 604 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 RGL1Q9NZL6 768 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms