RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 PSMD1Q99460 953 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 GOLPH3Q9H4A6 298 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 LARSQ9P2J5 1176 aaKnown RBP18.3■□□□□ 0.52
VPS26B-206ENST00000531741 AMFRQ9UKV5 643 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 ZNF233A6NK53 670 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 MYO1CO00159 1063 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 SART1O43290 800 aaKnown RBP18.3■□□□□ 0.52
VPS26B-206ENST00000531741 LYPLA2O95372 231 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 ECHS1P30084 290 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 PPATQ06203 517 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 PADI6Q6TGC4 694 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 INTS8Q75QN2 995 aaKnown RBP18.3■□□□□ 0.52
VPS26B-206ENST00000531741 GLYCTKQ8IVS8 523 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 SEC14L1Q92503 715 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 TMCO5BA8MYB1 307 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 MAPK13O15264 365 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 EIF3HO15372 352 aaKnown RBP eCLIP18.29■□□□□ 0.52
VPS26B-206ENST00000531741 EXOC3O60645 756 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 HADHBP55084 474 aaKnown RBP18.29■□□□□ 0.52
VPS26B-206ENST00000531741 MCCD1P59942 119 aaPredicted RBP18.29■□□□□ 0.52
VPS26B-206ENST00000531741 SNRPFP62306 86 aaKnown RBP18.29■□□□□ 0.52
VPS26B-206ENST00000531741 TNIP1Q15025 636 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 LRIG3Q6UXM1 1119 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 DNAAF5Q86Y56 855 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 RTKN2Q8IZC4 609 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 SYCP3Q8IZU3 236 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 BANK1Q8NDB2 785 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 CTNNBL1Q8WYA6 563 aaPredicted RBP18.29■□□□□ 0.52
VPS26B-206ENST00000531741 ST6GALNAC4Q9H4F1 302 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 TNS1Q9HBL0 1735 aaKnown RBP18.29■□□□□ 0.52
VPS26B-206ENST00000531741 ZNF536O15090 1300 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 GRIN2DO15399 1336 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 PMM2O15305 246 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 ASNSP08243 561 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 TRIM49P0CI25 452 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 TRIM49CP0CI26 452 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 KRT13P13646 458 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 TCEAL1Q15170 157 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 MIER3Q7Z3K6 550 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 SAMD3Q8N6K7 520 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 SLC35G2Q8TBE7 412 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 TIPINQ9BVW5 301 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 KCNH7Q9NS40 1196 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 FBXO28Q9NVF7 368 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 PGAP2Q9UHJ9 254 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 USP20Q9Y2K6 914 aa18.29■□□□□ 0.52
VPS26B-206ENST00000531741 ANKRD62A6NC57 917 aa18.28■□□□□ 0.52
VPS26B-206ENST00000531741 KRIT1O00522 736 aa18.28■□□□□ 0.52
VPS26B-206ENST00000531741 DHX15O43143 795 aaKnown RBP18.28■□□□□ 0.52
VPS26B-206ENST00000531741 C21orf2O43822 256 aa18.28■□□□□ 0.52
VPS26B-206ENST00000531741 BUB1BO60566 1050 aaPredicted RBP18.28■□□□□ 0.52
VPS26B-206ENST00000531741 GUCY2FP51841 1108 aa18.28■□□□□ 0.52
VPS26B-206ENST00000531741 CLUL1Q15846 466 aa18.28■□□□□ 0.52
VPS26B-206ENST00000531741 PPP2R5EQ16537 467 aa18.28■□□□□ 0.52
VPS26B-206ENST00000531741 MAATS1Q7Z4T9 603 aa18.28■□□□□ 0.52
VPS26B-206ENST00000531741 MCF2L2Q86YR7 1114 aa18.28■□□□□ 0.52
VPS26B-206ENST00000531741 CCDC26Q8TAB7 109 aa18.28■□□□□ 0.52
VPS26B-206ENST00000531741 LRRC45Q96CN5 670 aa18.28■□□□□ 0.52
VPS26B-206ENST00000531741 MAP3K20Q9NYL2 800 aaKnown RBP18.28■□□□□ 0.52
VPS26B-206ENST00000531741 LCMT1Q9UIC8 334 aa18.28■□□□□ 0.52
VPS26B-206ENST00000531741 CCPG1Q9ULG6 757 aa18.28■□□□□ 0.52
VPS26B-206ENST00000531741 UBIAD1Q9Y5Z9 338 aa18.28■□□□□ 0.52
VPS26B-206ENST00000531741 K7ENM7 598 aa18.27■□□□□ 0.52
VPS26B-206ENST00000531741 KRT14P02533 472 aa18.27■□□□□ 0.52
VPS26B-206ENST00000531741 CETN1Q12798 172 aa18.27■□□□□ 0.52
VPS26B-206ENST00000531741 TRADDQ15628 312 aa18.27■□□□□ 0.52
VPS26B-206ENST00000531741 PHLDB3Q6NSJ2 640 aa18.27■□□□□ 0.52
VPS26B-206ENST00000531741 KDM7AQ6ZMT4 941 aa18.27■□□□□ 0.52
VPS26B-206ENST00000531741 ACCSQ96QU6 501 aa18.27■□□□□ 0.52
VPS26B-206ENST00000531741 FEZ2Q9UHY8 353 aaPredicted RBP18.27■□□□□ 0.52
VPS26B-206ENST00000531741 TNFAIP3P21580 790 aa18.27■□□□□ 0.51
VPS26B-206ENST00000531741 SLC20A2Q08357 652 aa18.27■□□□□ 0.51
VPS26B-206ENST00000531741 DNAJC21Q5F1R6 531 aaKnown RBP18.27■□□□□ 0.51
VPS26B-206ENST00000531741 PCNX4Q63HM2 1172 aa18.27■□□□□ 0.51
VPS26B-206ENST00000531741 CLEC4DQ8WXI8 215 aa18.27■□□□□ 0.51
VPS26B-206ENST00000531741 AP1M1Q9BXS5 423 aa18.27■□□□□ 0.51
VPS26B-206ENST00000531741 TMEM39BQ9GZU3 492 aa18.27■□□□□ 0.51
VPS26B-206ENST00000531741 CARD9Q9H257 536 aa18.27■□□□□ 0.51
VPS26B-206ENST00000531741 VPS33BQ9H267 617 aa18.27■□□□□ 0.51
VPS26B-206ENST00000531741 RSPH14Q9UHP6 348 aa18.27■□□□□ 0.51
VPS26B-206ENST00000531741 HMGB1P1B2RPK0 211 aaPredicted RBP18.26■□□□□ 0.51
VPS26B-206ENST00000531741 DDX3YO15523 660 aaKnown RBP18.26■□□□□ 0.51
VPS26B-206ENST00000531741 RAD17O75943 681 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 PLS3P13797 630 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 RARRES1P49788 294 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 GNGT1P63211 74 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 PLS1Q14651 629 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 ZYXQ15942 572 aaKnown RBP18.26■□□□□ 0.51
VPS26B-206ENST00000531741 RHOT2Q8IXI1 618 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 PRPF38AQ8NAV1 312 aaKnown RBP18.26■□□□□ 0.51
VPS26B-206ENST00000531741 AGBL1Q96MI9 1066 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 NAP1L3Q99457 506 aaPredicted RBP18.26■□□□□ 0.51
VPS26B-206ENST00000531741 AGO4Q9HCK5 861 aaKnown RBP18.26■□□□□ 0.51
VPS26B-206ENST00000531741 OSGEPQ9NPF4 335 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 COL20A1Q9P218 1284 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 ZHX2Q9Y6X8 837 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 ZEB2O60315 1214 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 QARSP47897 775 aaKnown RBP18.26■□□□□ 0.51
VPS26B-206ENST00000531741 VAMP7P51809 220 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 POU5F1Q01860 360 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms