RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 GRXCR1A8MXD5 290 aa7.01□□□□□ -1.29
PTPRK-220ENST00000531466 MFAP3LO75121 409 aa7.01□□□□□ -1.29
PTPRK-220ENST00000531466 ABHD16AO95870 558 aa7.01□□□□□ -1.29
PTPRK-220ENST00000531466 FBLP22087 321 aaKnown RBP7.01□□□□□ -1.29
PTPRK-220ENST00000531466 TRIM61Q5EBN2 209 aa7.01□□□□□ -1.29
PTPRK-220ENST00000531466 LY6G5CQ5SRR4 150 aa7.01□□□□□ -1.29
PTPRK-220ENST00000531466 MFSD5Q6N075 450 aa7.01□□□□□ -1.29
PTPRK-220ENST00000531466 KCNV1Q6PIU1 500 aa7.01□□□□□ -1.29
PTPRK-220ENST00000531466 FGD2Q7Z6J4 655 aa7.01□□□□□ -1.29
PTPRK-220ENST00000531466 MDGA1Q8NFP4 955 aa7.01□□□□□ -1.29
PTPRK-220ENST00000531466 ZNF428Q96B54 188 aa7.01□□□□□ -1.29
PTPRK-220ENST00000531466 KCMF1Q9P0J7 381 aa7.01□□□□□ -1.29
PTPRK-220ENST00000531466 IPO13O94829 963 aaKnown RBP7□□□□□ -1.29
PTPRK-220ENST00000531466 HNRNPLP14866 589 aaKnown RBP eCLIP7□□□□□ -1.29
PTPRK-220ENST00000531466 FNTBP49356 437 aa7□□□□□ -1.29
PTPRK-220ENST00000531466 KIF11P52732 1056 aa7□□□□□ -1.29
PTPRK-220ENST00000531466 MRPS21P82921 87 aaKnown RBP7□□□□□ -1.29
PTPRK-220ENST00000531466 PTPAQ15257 358 aa7□□□□□ -1.29
PTPRK-220ENST00000531466 OTOP1Q7RTM1 612 aa7□□□□□ -1.29
PTPRK-220ENST00000531466 CPT1CQ8TCG5 803 aa7□□□□□ -1.29
PTPRK-220ENST00000531466 MAML3Q96JK9 1138 aa7□□□□□ -1.29
PTPRK-220ENST00000531466 RIOX1Q9H6W3 641 aa7□□□□□ -1.29
PTPRK-220ENST00000531466 POLR3BQ9NW08 1133 aaPredicted RBP7□□□□□ -1.29
PTPRK-220ENST00000531466 PACSIN3Q9UKS6 424 aa7□□□□□ -1.29
PTPRK-220ENST00000531466 FZD1Q9UP38 647 aa7□□□□□ -1.29
PTPRK-220ENST00000531466 SORCS3Q9UPU3 1222 aa7□□□□□ -1.29
PTPRK-220ENST00000531466 UBA6A0AVT1 1052 aaPredicted RBP6.99□□□□□ -1.29
PTPRK-220ENST00000531466 GRID2IPA4D2P6 1211 aa6.99□□□□□ -1.29
PTPRK-220ENST00000531466 DVL2O14641 736 aa6.99□□□□□ -1.29
PTPRK-220ENST00000531466 STC2O76061 302 aa6.99□□□□□ -1.29
PTPRK-220ENST00000531466 JUNP05412 331 aaKnown RBP6.99□□□□□ -1.29
PTPRK-220ENST00000531466 ITGB1P05556 798 aa6.99□□□□□ -1.29
PTPRK-220ENST00000531466 PRAMEF9Q5VWM5 478 aa6.99□□□□□ -1.29
PTPRK-220ENST00000531466 PTGFRNQ9P2B2 879 aa6.99□□□□□ -1.29
PTPRK-220ENST00000531466 NPTXRO95502 500 aa6.98□□□□□ -1.29
PTPRK-220ENST00000531466 HK1P19367 917 aa6.98□□□□□ -1.29
PTPRK-220ENST00000531466 ZC3H12BQ5HYM0 836 aaKnown RBP6.98□□□□□ -1.29
PTPRK-220ENST00000531466 TTC38Q5R3I4 469 aa6.98□□□□□ -1.29
PTPRK-220ENST00000531466 LRRC55Q6ZSA7 311 aa6.98□□□□□ -1.29
PTPRK-220ENST00000531466 ST8SIA2Q92186 375 aa6.98□□□□□ -1.29
PTPRK-220ENST00000531466 SIRPGQ9P1W8 387 aa6.98□□□□□ -1.29
PTPRK-220ENST00000531466 DAPK3O43293 454 aa6.97□□□□□ -1.29
PTPRK-220ENST00000531466 GNAT2P19087 354 aa6.97□□□□□ -1.29
PTPRK-220ENST00000531466 NPEPPSP55786 919 aa6.97□□□□□ -1.29
PTPRK-220ENST00000531466 SPIDRQ14159 915 aa6.97□□□□□ -1.29
PTPRK-220ENST00000531466 FAM214AQ32MH5 1076 aa6.97□□□□□ -1.29
PTPRK-220ENST00000531466 NBPF6Q5VWK0 638 aa6.97□□□□□ -1.29
PTPRK-220ENST00000531466 BMP8AQ7Z5Y6 402 aa6.97□□□□□ -1.29
PTPRK-220ENST00000531466 CMTM4Q8IZR5 234 aa6.97□□□□□ -1.29
PTPRK-220ENST00000531466 THAP3Q8WTV1 239 aaPredicted RBP6.97□□□□□ -1.29
PTPRK-220ENST00000531466 ZNF764Q96H86 408 aaPredicted RBP6.97□□□□□ -1.29
PTPRK-220ENST00000531466 NBPF4Q96M43 638 aa6.97□□□□□ -1.29
PTPRK-220ENST00000531466 TUBGCP5Q96RT8 1024 aa6.97□□□□□ -1.29
PTPRK-220ENST00000531466 C14orf93Q9H972 538 aaKnown RBP6.97□□□□□ -1.29
PTPRK-220ENST00000531466 FAM221BA6H8Z2 402 aa6.96□□□□□ -1.3
PTPRK-220ENST00000531466 M0R2C6 588 aa6.96□□□□□ -1.3
PTPRK-220ENST00000531466 MECP2P51608 486 aaKnown RBP6.96□□□□□ -1.3
PTPRK-220ENST00000531466 HECTD2Q5U5R9 776 aa6.96□□□□□ -1.3
PTPRK-220ENST00000531466 NAIF1Q69YI7 327 aaPredicted RBP6.96□□□□□ -1.3
PTPRK-220ENST00000531466 CXorf67Q86X51 503 aaPredicted RBP6.96□□□□□ -1.3
PTPRK-220ENST00000531466 PRIMA1Q86XR5 153 aa6.96□□□□□ -1.3
PTPRK-220ENST00000531466 HS3ST4Q9Y661 456 aa6.96□□□□□ -1.3
PTPRK-220ENST00000531466 MASP2O00187 686 aa6.95□□□□□ -1.3
PTPRK-220ENST00000531466 SCAF4O95104 1147 aaKnown RBP6.95□□□□□ -1.3
PTPRK-220ENST00000531466 ZFP36P26651 326 aaKnown RBP6.95□□□□□ -1.3
PTPRK-220ENST00000531466 KIR2DL3P43628 341 aa6.95□□□□□ -1.3
PTPRK-220ENST00000531466 PTTG1IPP53801 180 aa6.95□□□□□ -1.3
PTPRK-220ENST00000531466 RASA3Q14644 834 aa6.95□□□□□ -1.3
PTPRK-220ENST00000531466 MYBPC3Q14896 1274 aa6.95□□□□□ -1.3
PTPRK-220ENST00000531466 TIGD2Q4W5G0 525 aa6.95□□□□□ -1.3
PTPRK-220ENST00000531466 BEND2Q8NDZ0 799 aa6.95□□□□□ -1.3
PTPRK-220ENST00000531466 NTN5Q8WTR8 489 aaPredicted RBP6.95□□□□□ -1.3
PTPRK-220ENST00000531466 FAM193BQ96PV7 902 aaPredicted RBP6.95□□□□□ -1.3
PTPRK-220ENST00000531466 DEPDC7Q96QD5 511 aa6.95□□□□□ -1.3
PTPRK-220ENST00000531466 HAPLN2Q9GZV7 340 aa6.95□□□□□ -1.3
PTPRK-220ENST00000531466 PCIF1Q9H4Z3 704 aa6.95□□□□□ -1.3
PTPRK-220ENST00000531466 ZNF768Q9H5H4 540 aaKnown RBP6.95□□□□□ -1.3
PTPRK-220ENST00000531466 TRIM39Q9HCM9 518 aa6.95□□□□□ -1.3
PTPRK-220ENST00000531466 ACSS2Q9NR19 701 aa6.95□□□□□ -1.3
PTPRK-220ENST00000531466 ZAR1LA6NP61 321 aa6.94□□□□□ -1.3
PTPRK-220ENST00000531466 B3GALT2O43825 422 aa6.94□□□□□ -1.3
PTPRK-220ENST00000531466 ARHGAP44Q17R89 818 aa6.94□□□□□ -1.3
PTPRK-220ENST00000531466 DCAF17Q5H9S7 520 aaPredicted RBP6.94□□□□□ -1.3
PTPRK-220ENST00000531466 RPGRQ92834 1020 aaKnown RBP6.94□□□□□ -1.3
PTPRK-220ENST00000531466 MRPL4Q9BYD3 311 aaKnown RBP6.94□□□□□ -1.3
PTPRK-220ENST00000531466 WDR26Q9H7D7 661 aa6.94□□□□□ -1.3
PTPRK-220ENST00000531466 KCNQ2O43526 872 aa6.93□□□□□ -1.3
PTPRK-220ENST00000531466 GLRX3O76003 335 aaKnown RBP6.93□□□□□ -1.3
PTPRK-220ENST00000531466 PTX3P26022 381 aaPredicted RBP6.93□□□□□ -1.3
PTPRK-220ENST00000531466 BCAR1P56945 870 aa6.93□□□□□ -1.3
PTPRK-220ENST00000531466 CSRP2Q16527 193 aa6.93□□□□□ -1.3
PTPRK-220ENST00000531466 PLEKHG4Q58EX7 1191 aa6.93□□□□□ -1.3
PTPRK-220ENST00000531466 APBB1IPQ7Z5R6 666 aaPredicted RBP6.93□□□□□ -1.3
PTPRK-220ENST00000531466 DDX53Q86TM3 631 aaKnown RBP6.93□□□□□ -1.3
PTPRK-220ENST00000531466 ADGRG3Q86Y34 549 aa6.93□□□□□ -1.3
PTPRK-220ENST00000531466 CHST14Q8NCH0 376 aa6.93□□□□□ -1.3
PTPRK-220ENST00000531466 C16orf92Q96LL3 132 aa6.93□□□□□ -1.3
PTPRK-220ENST00000531466 BBC3Q96PG8 261 aaPredicted RBP6.93□□□□□ -1.3
PTPRK-220ENST00000531466 DNAJC7Q99615 494 aa6.93□□□□□ -1.3
PTPRK-220ENST00000531466 SAMD15Q9P1V8 674 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms