RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 KSR1Q8IVT5 923 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 MREGQ8N565 214 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 SCFD2Q8WU76 684 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 ACCSQ96QU6 501 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 KRT12Q99456 494 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 NCANO14594 1321 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 CCDC188H7C350 402 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 HSF2BPO75031 334 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 FDX1P10109 184 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 DNA2P51530 1060 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 EN1Q05925 392 aaPredicted RBP18.71■□□□□ 0.59
BRCA2-204ENST00000530893 WHAMMQ8TF30 809 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 U2AF1L4Q8WU68 220 aaKnown RBP18.71■□□□□ 0.59
BRCA2-204ENST00000530893 ZFP91Q96JP5 570 aaPredicted RBP18.71■□□□□ 0.59
BRCA2-204ENST00000530893 GPR88Q9GZN0 384 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 EPB41L5Q9HCM4 733 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 MYOZ2Q9NPC6 264 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 STXBP5LQ9Y2K9 1186 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 DDX39AO00148 427 aaKnown RBP18.7■□□□□ 0.58
BRCA2-204ENST00000530893 PGRMC1O00264 195 aaKnown RBP18.7■□□□□ 0.58
BRCA2-204ENST00000530893 ZBTB48P10074 688 aaPredicted RBP18.7■□□□□ 0.58
BRCA2-204ENST00000530893 DPEP1P16444 411 aa18.7■□□□□ 0.58
BRCA2-204ENST00000530893 GALCP54803 685 aa18.7■□□□□ 0.58
BRCA2-204ENST00000530893 GUCY2DQ02846 1103 aa18.7■□□□□ 0.58
BRCA2-204ENST00000530893 CXCL9Q07325 125 aa18.7■□□□□ 0.58
BRCA2-204ENST00000530893 KIF22Q14807 665 aa18.7■□□□□ 0.58
BRCA2-204ENST00000530893 NBPF9Q3BBW0 867 aa18.7■□□□□ 0.58
BRCA2-204ENST00000530893 RASGEF1CQ8N431 466 aa18.7■□□□□ 0.58
BRCA2-204ENST00000530893 FAM76AQ8TAV0 307 aa18.7■□□□□ 0.58
BRCA2-204ENST00000530893 LNX1Q8TBB1 728 aaPredicted RBP18.7■□□□□ 0.58
BRCA2-204ENST00000530893 SYTL5Q8TDW5 730 aaPredicted RBP18.7■□□□□ 0.58
BRCA2-204ENST00000530893 RFFLQ8WZ73 363 aa18.7■□□□□ 0.58
BRCA2-204ENST00000530893 RUFY1Q96T51 708 aa18.7■□□□□ 0.58
BRCA2-204ENST00000530893 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.7■□□□□ 0.58
BRCA2-204ENST00000530893 DIS3Q9Y2L1 958 aaKnown RBP18.7■□□□□ 0.58
BRCA2-204ENST00000530893 GOLGA6CA6NDK9 693 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 PMM2O15305 246 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 GOLGA6DP0CG33 693 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 MRPS9P82933 396 aaKnown RBP18.69■□□□□ 0.58
BRCA2-204ENST00000530893 ITGB3BPQ13352 177 aaPredicted RBP18.69■□□□□ 0.58
BRCA2-204ENST00000530893 C4orf19Q8IY42 314 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 OLIG1Q8TAK6 271 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 GOLGA6AQ9NYA3 693 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 SAMM50Q9Y512 469 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 TRIM49P0CI25 452 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 TRIM49CP0CI26 452 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 ALAS1P13196 640 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 SFNP31947 248 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 JAK3P52333 1124 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 MCCD1P59942 119 aaPredicted RBP18.69■□□□□ 0.58
BRCA2-204ENST00000530893 GTF2BQ00403 316 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 RASA3Q14644 834 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 CIAPIN1Q6FI81 312 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 DAAM2Q86T65 1068 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 NT5DC3Q86UY8 548 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 GLYCTKQ8IVS8 523 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 IL31RAQ8NI17 732 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 LMO3Q8TAP4 145 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 CTNNBL1Q8WYA6 563 aaPredicted RBP18.69■□□□□ 0.58
BRCA2-204ENST00000530893 RIN2Q8WYP3 895 aaPredicted RBP18.69■□□□□ 0.58
BRCA2-204ENST00000530893 HES6Q96HZ4 224 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 HINFPQ9BQA5 517 aa18.69■□□□□ 0.58
BRCA2-204ENST00000530893 CEP104O60308 925 aa18.68■□□□□ 0.58
BRCA2-204ENST00000530893 CTNND1O60716 968 aaKnown RBP18.68■□□□□ 0.58
BRCA2-204ENST00000530893 YWHABP31946 246 aaKnown RBP18.68■□□□□ 0.58
BRCA2-204ENST00000530893 CARSP49589 748 aaKnown RBP18.68■□□□□ 0.58
BRCA2-204ENST00000530893 VAMP7P51809 220 aa18.68■□□□□ 0.58
BRCA2-204ENST00000530893 MRPS25P82663 173 aaKnown RBP18.68■□□□□ 0.58
BRCA2-204ENST00000530893 XRRA1Q6P2D8 792 aa18.68■□□□□ 0.58
BRCA2-204ENST00000530893 POTEAQ6S8J7 498 aa18.68■□□□□ 0.58
BRCA2-204ENST00000530893 METTL13Q8N6R0 699 aa18.68■□□□□ 0.58
BRCA2-204ENST00000530893 CCDC43Q96MW1 224 aaKnown RBP18.68■□□□□ 0.58
BRCA2-204ENST00000530893 TTC7AQ9ULT0 858 aaPredicted RBP18.68■□□□□ 0.58
BRCA2-204ENST00000530893 NFU1Q9UMS0 254 aa18.68■□□□□ 0.58
BRCA2-204ENST00000530893 USP20Q9Y2K6 914 aa18.68■□□□□ 0.58
BRCA2-204ENST00000530893 A6NNZ2 444 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 TMCO5BA8MYB1 307 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 TNFAIP3P21580 790 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 CUL1Q13616 776 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 CLUL1Q15846 466 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 TUBB8Q3ZCM7 444 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 XXYLT1Q8NBI6 393 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 RDM1Q8NG50 284 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 ISCUQ9H1K1 167 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 AMFRQ9UKV5 643 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 PPP1R9AQ9ULJ8 1098 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 ANKRD62A6NC57 917 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 RAD51CO43502 376 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 PSMC5P62195 406 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 KRT76Q01546 638 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 PGM5Q15124 567 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 PHLDB3Q6NSJ2 640 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 CPXCR1Q8N123 301 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 TSEN2Q8NCE0 465 aaKnown RBP18.67■□□□□ 0.58
BRCA2-204ENST00000530893 SLC16A10Q8TF71 515 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 TEPSINQ96N21 525 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 TAF1DQ9H5J8 278 aaPredicted RBP18.67■□□□□ 0.58
BRCA2-204ENST00000530893 SLITRK6Q9H5Y7 841 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 ANKEF1Q9NU02 776 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 TCEAL9Q9UHQ7 104 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms