RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 SPATA24Q86W54 205 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 CSGALNACT2Q8N6G5 542 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 LRRC57Q8N9N7 239 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 PPFIBP2Q8ND30 876 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 SAR1AQ9NR31 198 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 INIPQ9NRY2 104 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 ZSWIM5Q9P217 1185 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 NOC2LQ9Y3T9 749 aaKnown RBP8.76□□□□□ -1.01
CSDE1-214ENST00000530886 CCDC162PA2VCL2 907 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 DCTN3O75935 186 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 IFIT1P09914 478 aaKnown RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 ALOX15P16050 662 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 PTPN4P29074 926 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 LTKP29376 864 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 ADORA1P30542 326 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 HOXA7P31268 230 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 ADD2P35612 726 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 MLH1P40692 756 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 IL15P40933 162 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 EHHADHQ08426 723 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 R3HDM1Q15032 1099 aaKnown RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 VWA3BQ502W6 1294 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 ZC2HC1CQ53FD0 456 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 SYDE2Q5VT97 1194 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 MICU3Q86XE3 530 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 P2RX5Q93086 422 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 ZNF512BQ96KM6 892 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 AGBL1Q96MI9 1066 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 ARPC5LQ9BPX5 153 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 DNAJB4Q9UDY4 337 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 MAP3K7O43318 606 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 ASMTLO95671 621 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 KLRC1P26715 233 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 RAB15P59190 212 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 HNRNPDQ14103 355 aaKnown RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 SLC18A3Q16572 532 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 LMBR1LQ6UX01 489 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 SEPT14Q6ZU15 432 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 INTS8Q75QN2 995 aaKnown RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 SLFN11Q7Z7L1 901 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 RBM46Q8TBY0 533 aaKnown RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 PPP1R12CQ9BZL4 782 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 DIS3Q9Y2L1 958 aaKnown RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 RPTORQ8N122 1335 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 PITPNM2Q9BZ72 1349 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 CICQ96RK0 1608 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 ENTPD5O75356 428 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 ATP5DP30049 168 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 TRAPPC10P48553 1259 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 EMP3P54852 163 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 SESN3P58005 492 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 MAP3K10Q02779 954 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 SLC9C1Q4G0N8 1177 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 KHDC1Q4VXA5 237 aaKnown RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 ARL6IP4Q66PJ3 421 aaKnown RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 ZNF790Q6PG37 636 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 VSTM1Q6UX27 236 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 RGS9BPQ6ZS82 235 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 ST13P4Q8IZP2 240 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 HAUS1Q96CS2 278 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 MAGEF1Q9HAY2 307 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 KRT82Q9NSB4 513 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 FAIMQ9NVQ4 179 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 ZDHHC7Q9NXF8 308 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 KIAA1522Q9P206 1035 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 CEP126Q9P2H0 1117 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 CHMP2BQ9UQN3 213 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 CTDP1Q9Y5B0 961 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-214ENST00000530886 USH1CQ9Y6N9 552 aa8.75□□□□□ -1.01
CSDE1-214ENST00000530886 KANSL1LA0AUZ9 987 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 B4E1Z4 1266 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 EYA2O00167 538 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 KCNK3O14649 394 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 AP1G1O43747 822 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 HNRNPCP07910 306 aaKnown RBP eCLIP8.74□□□□□ -1.013e-6■■■□□ 18.5
CSDE1-214ENST00000530886 POLD1P28340 1107 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 LONP1P36776 959 aaKnown RBP8.74□□□□□ -1.01
CSDE1-214ENST00000530886 NLRP6P59044 892 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 PTENP60484 403 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 AIMP1Q12904 312 aaKnown RBP8.74□□□□□ -1.01
CSDE1-214ENST00000530886 PPP2R5BQ15173 497 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 CLUL1Q15846 466 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 SLC44A4Q53GD3 710 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 ANKRD13DQ6ZTN6 518 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 PASD1Q8IV76 773 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 CCDC65Q8IXS2 484 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 PCMTD1Q96MG8 357 aaPredicted RBP8.74□□□□□ -1.01
CSDE1-214ENST00000530886 NLRP3Q96P20 1036 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 SYNCQ9H7C4 482 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 SUCLA2Q9P2R7 463 aaPredicted RBP8.74□□□□□ -1.01
CSDE1-214ENST00000530886 SSX2IPQ9Y2D8 614 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 KRIT1O00522 736 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 MAPK13O15264 365 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 TTI1O43156 1089 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 CCNFP41002 786 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 TXKP42681 527 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 IFNAR2P48551 515 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 ADARP55265 1226 aaKnown RBP8.74□□□□□ -1.01
CSDE1-214ENST00000530886 HDAC4P56524 1084 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms