RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 CALM3P0DP25 149 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 GPC3P51654 580 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 CLCN4P51793 760 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 AAMPQ13685 434 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 GIT2Q14161 759 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 PTPN14Q15678 1187 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 CABP7Q86V35 215 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 LRRC71Q8N4P6 559 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 RSAD2Q8WXG1 361 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 TMEM87BQ96K49 555 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 TRAIPQ9BWF2 469 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 MRPL9Q9BYD2 267 aaKnown RBP12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 NRDE2Q9H7Z3 1164 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 WNT16Q9UBV4 365 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 CNTNAP5Q8WYK1 1306 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 CCDC69A6NI79 296 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 MEIS3P2A8K0S8 358 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 CSDE1O75534 798 aaKnown RBP12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 CYP3A4P08684 503 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 CNPP09543 421 aaKnown RBP12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 MCM5P33992 734 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 PHKA2P46019 1235 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 PUM1Q14671 1186 aaKnown RBP eCLIP12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 LETM2Q2VYF4 491 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 ZNF746Q6NUN9 644 aaPredicted RBP12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 PPP1R18Q6NYC8 613 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 CASC1Q6TDU7 716 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 NFXL1Q6ZNB6 911 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 CCDC149Q6ZUS6 474 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 TRMT1LQ7Z2T5 733 aaKnown RBP12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 PLA2G4DQ86XP0 818 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 ZNF710Q8N1W2 664 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 KLHL5Q96PQ7 755 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 SFXN1Q9H9B4 322 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 TBC1D13Q9NVG8 400 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 IGSF9Q9P2J2 1179 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 DNAJB4Q9UDY4 337 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 AKT3Q9Y243 479 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 RBM8AQ9Y5S9 174 aaKnown RBP12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 USP24Q9UPU5 2620 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 C2orf16Q68DN1 1984 aa12.09□□□□□ -0.47
TM9SF1-210ENST00000530563 SMCO2A6NFE2 343 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 ZC3H11AO75152 810 aaKnown RBP eCLIP12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 OFD1O75665 1012 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 PAPLNO95428 1278 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 CFHP08603 1231 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 CA8P35219 290 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 SLC11A1P49279 550 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 ADCY7P51828 1080 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 NAPAP54920 295 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 AP3B2Q13367 1082 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 DRP2Q13474 957 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 BMS1Q14692 1282 aaKnown RBP12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 C15orf39Q6ZRI6 1047 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 SGMS1Q86VZ5 419 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 PPFIBP1Q86W92 1011 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 ZNF280BQ86YH2 543 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 CKAP2LQ8IYA6 745 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 SMAP1Q8IYB5 467 aaPredicted RBP12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 MAML2Q8IZL2 1156 aaPredicted RBP12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 SLC44A3Q8N4M1 653 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 DCLK2Q8N568 766 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 CMASQ8NFW8 434 aaPredicted RBP12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 KCNG4Q8TDN1 519 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 RUFY2Q8WXA3 655 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 RIN2Q8WYP3 895 aaPredicted RBP12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 LPPQ93052 612 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 CEP89Q96ST8 783 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 RHOBTB2Q9BYZ6 727 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 CHST12Q9NRB3 414 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 TBC1D22BQ9NU19 505 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 GABBR1Q9UBS5 961 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 FBXL21Q9UKT6 434 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 PCDHA10Q9Y5I2 948 aa12.08□□□□□ -0.48
TM9SF1-210ENST00000530563 CACNA1IQ9P0X4 2223 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 EDIL3O43854 480 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 ZNF623O75123 536 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 EFEMP2O95967 443 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 SP9P0CG40 484 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 GLULP15104 373 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 AFF1P51825 1210 aaKnown RBP12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 TARBP2Q15633 366 aaKnown RBP12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 LONRF3Q496Y0 759 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 NOMO2Q5JPE7 1267 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 FANCMQ8IYD8 2048 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 SUMF1Q8NBK3 374 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 RSPH1Q8WYR4 309 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 LENG9Q96B70 501 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 CNTNAP3BQ96NU0 1288 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 MYADMQ96S97 322 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 MAP7D2Q96T17 732 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 ZNF577Q9BSK1 485 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 LRRC2Q9BYS8 371 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 CNTNAP3Q9BZ76 1288 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 WDR6Q9NNW5 1121 aaKnown RBP12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 BARHL2Q9NY43 387 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 DACT1Q9NYF0 836 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 EPS15L1Q9UBC2 864 aa12.07□□□□□ -0.48
TM9SF1-210ENST00000530563 CEP131Q9UPN4 1083 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms