RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 HSPA4P34932 840 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 BCAR1P56945 870 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 DRP2Q13474 957 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 BMS1Q14692 1282 aaKnown RBP16.82■□□□□ 0.28
CAPN1-219ENST00000530495 LRCH2Q5VUJ6 765 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 RDM1Q8NG50 284 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 RSPH1Q8WYR4 309 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 RIPOR3Q96MK2 946 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 SCLT1Q96NL6 688 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 CEP89Q96ST8 783 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 TEKT3Q9BXF9 490 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 GCOM2Q9BZD3 368 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-219ENST00000530495 IRF2BPLQ9H1B7 796 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 VPS54Q9P1Q0 977 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 SNX14Q9Y5W7 946 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 MYO10Q9HD67 2058 aa16.82■□□□□ 0.28
CAPN1-219ENST00000530495 IGKV6-21A0A0C4DH24 114 aa16.81■□□□□ 0.28
CAPN1-219ENST00000530495 CHMP2AO43633 222 aa16.81■□□□□ 0.28
CAPN1-219ENST00000530495 CSDE1O75534 798 aaKnown RBP16.81■□□□□ 0.28
CAPN1-219ENST00000530495 NUBP1P53384 320 aa16.81■□□□□ 0.28
CAPN1-219ENST00000530495 EVCP57679 992 aa16.81■□□□□ 0.28
CAPN1-219ENST00000530495 Q4G0T1 1027 aa16.81■□□□□ 0.28
CAPN1-219ENST00000530495 XKR3Q5GH77 459 aa16.81■□□□□ 0.28
CAPN1-219ENST00000530495 CENPQQ7L2Z9 268 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-219ENST00000530495 ZBTB33Q86T24 672 aa16.81■□□□□ 0.28
CAPN1-219ENST00000530495 KREMEN2Q8NCW0 462 aa16.81■□□□□ 0.28
CAPN1-219ENST00000530495 SLC26A6Q9BXS9 759 aa16.81■□□□□ 0.28
CAPN1-219ENST00000530495 POMKQ9H5K3 350 aa16.81■□□□□ 0.28
CAPN1-219ENST00000530495 CDH22Q9UJ99 828 aa16.81■□□□□ 0.28
CAPN1-219ENST00000530495 IRAK3Q9Y616 596 aa16.81■□□□□ 0.28
CAPN1-219ENST00000530495 CYP3A7-CYP3A51PA0A087WV96 503 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 CARNS1A5YM72 827 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 NT5C1B-RDH14C9J2C7 533 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 SKIP12755 728 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 RPS6KB1P23443 525 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 SP100P23497 879 aaPredicted RBP16.8■□□□□ 0.28
CAPN1-219ENST00000530495 CYP3A7P24462 503 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 PDIA3P30101 505 aaKnown RBP16.8■□□□□ 0.28
CAPN1-219ENST00000530495 MTHFRP42898 656 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 PHKA2P46019 1235 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 DNM2P50570 870 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 B3GNT9Q6UX72 402 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 UBALD2Q8IYN6 164 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 TBCKQ8TEA7 893 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 GJA10Q969M2 543 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 TMEM169Q96HH4 297 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 SORCS3Q9UPU3 1222 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 ZDBF2Q9HCK1 2354 aa16.8■□□□□ 0.28
CAPN1-219ENST00000530495 A0A087WZ62 844 aa16.79■□□□□ 0.28
CAPN1-219ENST00000530495 C2CD4DB7Z1M9 353 aa16.79■□□□□ 0.28
CAPN1-219ENST00000530495 ST18O60284 1047 aa16.79■□□□□ 0.28
CAPN1-219ENST00000530495 POLGP54098 1239 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-219ENST00000530495 NLRP5P59047 1200 aa16.79■□□□□ 0.28
CAPN1-219ENST00000530495 MTMR3Q13615 1198 aa16.79■□□□□ 0.28
CAPN1-219ENST00000530495 GIT2Q14161 759 aa16.79■□□□□ 0.28
CAPN1-219ENST00000530495 MTERF2Q49AM1 385 aa16.79■□□□□ 0.28
CAPN1-219ENST00000530495 MIER3Q7Z3K6 550 aa16.79■□□□□ 0.28
CAPN1-219ENST00000530495 DDX53Q86TM3 631 aaKnown RBP16.79■□□□□ 0.28
CAPN1-219ENST00000530495 ZNF410Q86VK4 478 aa16.79■□□□□ 0.28
CAPN1-219ENST00000530495 VPS52Q8N1B4 723 aa16.79■□□□□ 0.28
CAPN1-219ENST00000530495 FDXACB1Q9BRP7 624 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-219ENST00000530495 C22orf23Q9BZE7 217 aa16.79■□□□□ 0.28
CAPN1-219ENST00000530495 INO80BQ9C086 356 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-219ENST00000530495 ZBP1Q9H171 429 aa16.79■□□□□ 0.28
CAPN1-219ENST00000530495 SEPT9Q9UHD8 586 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-219ENST00000530495 TMEM150BA6NC51 233 aa16.78■□□□□ 0.28
CAPN1-219ENST00000530495 ZNF623O75123 536 aa16.78■□□□□ 0.28
CAPN1-219ENST00000530495 MAFO75444 373 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-219ENST00000530495 BRD1O95696 1058 aa16.78■□□□□ 0.28
CAPN1-219ENST00000530495 PDGFBP01127 241 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-219ENST00000530495 CTSAP10619 480 aa16.78■□□□□ 0.28
CAPN1-219ENST00000530495 SFPQP23246 707 aaKnown RBP eCLIP16.78■□□□□ 0.28
CAPN1-219ENST00000530495 CCT2P78371 535 aaKnown RBP16.78■□□□□ 0.28
CAPN1-219ENST00000530495 TMEM173Q86WV6 379 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-219ENST00000530495 ZDHHC14Q8IZN3 488 aa16.78■□□□□ 0.28
CAPN1-219ENST00000530495 SLC22A17Q8WUG5 538 aa16.78■□□□□ 0.28
CAPN1-219ENST00000530495 IGSF21Q96ID5 467 aa16.78■□□□□ 0.28
CAPN1-219ENST00000530495 NRDE2Q9H7Z3 1164 aa16.78■□□□□ 0.28
CAPN1-219ENST00000530495 NCOA5Q9HCD5 579 aaKnown RBP16.78■□□□□ 0.28
CAPN1-219ENST00000530495 DZANK1Q9NVP4 752 aa16.78■□□□□ 0.28
CAPN1-219ENST00000530495 SUCLA2Q9P2R7 463 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-219ENST00000530495 PCDHA4Q9UN74 947 aa16.78■□□□□ 0.28
CAPN1-219ENST00000530495 DDX11L8A8MPP1 907 aa16.77■□□□□ 0.28
CAPN1-219ENST00000530495 M0R2N6 131 aa16.77■□□□□ 0.28
CAPN1-219ENST00000530495 ZC3H11AO75152 810 aaKnown RBP eCLIP16.77■□□□□ 0.28
CAPN1-219ENST00000530495 OFD1O75665 1012 aa16.77■□□□□ 0.28
CAPN1-219ENST00000530495 GALTP07902 379 aa16.77■□□□□ 0.28
CAPN1-219ENST00000530495 PSMA5P28066 241 aa16.77■□□□□ 0.28
CAPN1-219ENST00000530495 CA8P35219 290 aa16.77■□□□□ 0.28
CAPN1-219ENST00000530495 NOMO2Q5JPE7 1267 aa16.77■□□□□ 0.28
CAPN1-219ENST00000530495 ATAT1Q5SQI0 421 aa16.77■□□□□ 0.28
CAPN1-219ENST00000530495 RARS2Q5T160 578 aaKnown RBP16.77■□□□□ 0.28
CAPN1-219ENST00000530495 TWF2Q6IBS0 349 aaKnown RBP16.77■□□□□ 0.28
CAPN1-219ENST00000530495 GLB1LQ6UWU2 654 aa16.77■□□□□ 0.28
CAPN1-219ENST00000530495 RHPN2Q8IUC4 686 aa16.77■□□□□ 0.28
CAPN1-219ENST00000530495 C12orf76Q8N812 135 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-219ENST00000530495 TMEM87AQ8NBN3 555 aa16.77■□□□□ 0.28
CAPN1-219ENST00000530495 ATOH1Q92858 354 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-219ENST00000530495 LPPQ93052 612 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms